RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OR52E4Q8NGH9 312 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 OR2AJ1Q8NGZ0 328 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 PXYLP1Q8TE99 480 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 SORCS1Q8WY21 1168 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 NCSTNQ92542 709 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 KHSRPQ92945 711 aaKnown RBP eCLIP11.09□□□□□ -0.63
NOD1-201ENST00000222823 TAMM41Q96BW9 452 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HAVCR1Q96D42 359 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 COQ8BQ96D53 544 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 BHLHE41Q9C0J9 482 aaPredicted RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 POLE3Q9NRF9 147 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 DNAJC15Q9Y5T4 150 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 A6NHS1 94 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 C9J4A7 227 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 LATS1O95835 1130 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 ITGB1P05556 798 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 ASGR2P07307 311 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 KDELR2P33947 212 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 CD68P34810 354 aaPredicted RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 PAMR1Q6UXH9 720 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 GALNT7Q86SF2 657 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 CCDC116Q8IYX3 515 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 EPYCQ99645 322 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 SLC2A11Q9BYW1 496 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 R3HDMLQ9H3Y0 253 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RHCGQ9UBD6 479 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 A0A1W2PP55 124 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 M0QZQ0 153 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RFPL2O75678 378 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 PDYNP01213 254 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HSD3B1P14060 373 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 FDXRP22570 491 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HSD3B2P26439 372 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 TPTEP56180 551 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RAB15P59190 212 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RASGEF1BQ0VAM2 473 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 DOC2AQ14183 400 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 DECR1Q16698 335 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HSDL2Q6YN16 418 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 MRPL10Q7Z7H8 261 aaKnown RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 KRTCAP2Q8N6L1 136 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 TTC9BQ8N6N2 239 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 PHOSPHO1Q8TCT1 267 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RDH12Q96NR8 316 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 TRIB3Q96RU7 358 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 MEAF6Q9HAF1 191 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 BRD7Q9NPI1 651 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 CCM2LQ9NUG4 571 aaPredicted RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 GIN1Q9NXP7 522 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RBMX2Q9Y388 322 aaKnown RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 PCDHGA2Q9Y5H1 932 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 PTGDR2Q9Y5Y4 395 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 A0A096LPI6 279 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 A8MU76 341 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 AGXTP21549 392 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HTR1EP28566 365 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 TIA1P31483 386 aaKnown RBP eCLIP11.09□□□□□ -0.63
NOD1-201ENST00000222823 ID2Q02363 134 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 CD47Q08722 323 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 RAB33AQ14088 237 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 LINGO2Q7L985 606 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 ISCA2Q86U28 154 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 OR4K14Q8NGD5 310 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 SHDQ96IW2 340 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 MUS81Q96NY9 551 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 MCHR1Q99705 422 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.09□□□□□ -0.63
NOD1-201ENST00000222823 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 PMF1-BGLAPU3KQ54 211 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 ZNF726A6NNF4 738 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ABCB7O75027 752 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 CYB5AP00167 134 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 CYBAP13498 195 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 MAP3K8P41279 467 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 OR12D2P58182 307 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 HSF2Q03933 536 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 CBLBQ13191 982 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 TSTQ16762 297 aaKnown RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 ZNF648Q5T619 568 aaPredicted RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 SHQ1Q6PI26 577 aaKnown RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 SLC9B2Q86UD5 537 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 APCDD1Q8J025 514 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 OR2M4Q96R27 311 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 P2RY13Q9BPV8 354 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 LGR4Q9BXB1 951 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 DZANK1Q9NVP4 752 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 TMEM9Q9P0T7 183 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 PRAMEF33A0A0G2JMD5 474 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ZNF860A6NHJ4 632 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 WRBO00258 174 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 PRAMEF10O60809 474 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ITGA10O75578 1167 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms