RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ITFG1Q8TB96 612 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 PIF1Q9H611 641 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 UCK1Q9HA47 277 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 IL1RAPQ9NPH3 570 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 MLXQ9UH92 298 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 OAS3Q9Y6K5 1087 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 EFCAB10A6NFE3 127 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 F5H5T6 163 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 H7C2Y5 167 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 KIAA0513O60268 411 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 CLCN4P51793 760 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 DNAJB13P59910 316 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 HERVK_113P63132 956 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 RIPPLY1Q0D2K3 151 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 NFYCQ13952 458 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ZNF235Q14590 738 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 PTPRCAPQ14761 206 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 FAM83EQ2M2I3 478 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 OR52K2Q8NGK3 314 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 OR6S1Q8NH40 331 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 MYO19Q96H55 970 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 SIGLEC11Q96RL6 698 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 DPYSL5Q9BPU6 564 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 KCMF1Q9P0J7 381 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 PCDH17O14917 1159 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 ANKRD28O15084 1053 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 PLA2G10O15496 165 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 SEC14L5O43304 696 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 GJB5O95377 273 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 CSF3P09919 207 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 LTA4HP09960 611 aaKnown RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 HOXD9P28356 352 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 CDKN2DP55273 166 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 ABATP80404 500 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 PPP1R8Q12972 351 aaKnown RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 FAM180BQ6P0A1 224 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 TMEM207Q6UWW9 146 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 RTL4Q6ZR62 310 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 GHDCQ8N2G8 530 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 C2orf15Q8WU43 125 aaKnown RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 TMEM175Q9BSA9 504 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 DNAJC11Q9NVH1 559 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 ARL5AQ9Y689 179 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 PROM1O43490 865 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 WISP3O95389 354 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 MPC2O95563 127 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 ARSBP15848 533 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 EFNA1P20827 205 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 ACVR1Q04771 509 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 KIAA1191Q96A73 305 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 TSPAN17Q96FV3 270 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 TMEM74Q96NL1 305 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 GFM1Q96RP9 751 aaKnown RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 CFHR5Q9BXR6 569 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 NUSAP1Q9BXS6 441 aaKnown RBP13.1□□□□□ -0.31
GABPB1-201ENST00000220429 GALNT9Q9HCQ5 603 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 KIF25Q9UIL4 384 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 MAB21L2Q9Y586 359 aa13.1□□□□□ -0.31
GABPB1-201ENST00000220429 GBF1Q92538 1859 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 TRAV19A0A0A6YYK7 116 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 A8MT66 165 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PPP6CO00743 305 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 VPS26AO75436 327 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PIRTP0C851 137 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 HLA-DPA1P20036 260 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 OR4D2P58180 307 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 DSG2Q14126 1118 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 SWI5Q1ZZU3 235 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PYHIN1Q6K0P9 492 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 RPS27LQ71UM5 84 aaKnown RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PIGUQ9H490 435 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 MAGEL2Q9UJ55 1249 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 TRABD2BA6NFA1 517 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 H3BNC9 293 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 HTR3BO95264 441 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 FGF1P05230 155 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 FHP07954 510 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 ATP5C1P36542 298 aaKnown RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 GSTM5P46439 218 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 CAPN13Q6MZZ7 669 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms