RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 COMMD6Q7Z4G1 85 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 SLC30A8Q8IWU4 369 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 POC5Q8NA72 575 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 FBXO15Q8NCQ5 510 aaPredicted RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 NFKBIDQ8NI38 313 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PPCDCQ96CD2 204 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 EFCAB11Q9BUY7 163 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.76□□□□□ -0.37
SRP54-201ENST00000216774 ACER3Q9NUN7 267 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 MS4A12Q9NXJ0 267 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 MKLN1Q9UL63 735 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 DUSP12Q9UNI6 340 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 IFT52Q9Y366 437 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PNMA8CA0A1B0GUJ8 204 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 TSPAN11A1L157 253 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 HAT1O14929 419 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 SNX4O95219 450 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 MED26O95402 600 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 PABPC1P11940 636 aaKnown RBP12.75□□□□□ -0.37
SRP54-201ENST00000216774 CTSCP53634 463 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 CCL23P55773 120 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 CDK6Q00534 326 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 DMC1Q14565 340 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 ZNF648Q5T619 568 aaPredicted RBP12.75□□□□□ -0.37
SRP54-201ENST00000216774 C19orf48Q6RUI8 117 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 TMPRSS11BQ86T26 416 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 LAS2Q8IYD9 372 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 B3GNT7Q8NFL0 401 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 OR51E2Q9H255 320 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 TMEM165Q9HC07 324 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 MYNNQ9NPC7 610 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 SPG21Q9NZD8 308 aa12.75□□□□□ -0.37
SRP54-201ENST00000216774 CCNB2O95067 398 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 FUT4P22083 530 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CBLP22681 906 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 HOXD12P35452 270 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 SOX6P35712 828 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 TPTEP56180 551 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 PCBP3P57721 371 aaKnown RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 BCL2A1Q16548 175 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 AKAP14Q86UN6 197 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRP54-201ENST00000216774 OR9Q2Q8NGE9 314 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 HTRA1Q92743 480 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 FOXJ1Q92949 421 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 GLYATL1Q969I3 302 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CENPOQ9BU64 300 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 DMRT3Q9NQL9 472 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CFL2Q9Y281 166 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CFAP20Q9Y6A4 193 aaKnown RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 ENPP4Q9Y6X5 453 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 DENND4CQ5VZ89 1909 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 PQBP1O60828 265 aaKnown RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 KRT75O95678 551 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 DLGAP3O95886 979 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 ARAFP10398 606 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 RHCEP18577 417 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CHI3L1P36222 383 aaPredicted RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 SEPHS1P49903 392 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 PTGES3Q15185 160 aaKnown RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 KCNJ8Q15842 424 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 SLC5A12Q1EHB4 618 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 FAM71E1Q6IPT2 247 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 UNC5DQ6UXZ4 953 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 ARMCX6Q7L4S7 300 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 TMEM25Q86YD3 366 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 SLC44A2Q8IWA5 706 aaPredicted RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 LILRA3Q8N6C8 439 aaPredicted RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 ZNF557Q8N988 423 aaPredicted RBP12.74□□□□□ -0.37
SRP54-201ENST00000216774 CD99L2Q8TCZ2 262 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CHAC2Q8WUX2 184 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 ZNF480Q8WV37 535 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CHCHD6Q9BRQ6 235 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 SLC46A2Q9BY10 475 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 ATP11BQ9Y2G3 1177 aa12.74□□□□□ -0.37
SRP54-201ENST00000216774 CARNS1A5YM72 827 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 ZAR1LA6NP61 321 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PCDH17O14917 1159 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 SNPHO15079 494 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 LEFTY1O75610 366 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 GADD45GO95257 159 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 C1orf105O95561 183 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 LRG1P02750 347 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PIPP12273 146 aaPredicted RBP12.73□□□□□ -0.37
SRP54-201ENST00000216774 TIMP2P16035 220 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 ALDH9A1P49189 494 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 CASP9P55211 416 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 TBPL1P62380 186 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.73□□□□□ -0.37
SRP54-201ENST00000216774 TMEM115Q12893 351 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms