RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SNX33Q8WV41 574 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 EPHA6Q9UF33 1036 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 NSG1A0A0A6YYJ2 146 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 GFRA2O00451 464 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 DLL1O00548 723 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 EIF1AYO14602 144 aaKnown RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 PVRP15151 417 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 MATN1P21941 496 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 FOXN2P32314 431 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 SLC35B2Q8TB61 432 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 IFI44Q8TCB0 444 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 C6orf106Q9H6K1 298 aaPredicted RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 MANBAO00462 879 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 C1GALT1C1LP0DN25 315 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CHAF1BQ13112 559 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 DGUOKQ16854 277 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 OR4F3Q6IEY1 312 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 OR52E4Q8NGH9 312 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 A0A0J9YY10 115 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 ELOVL7A1L3X0 281 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 LCA5LO95447 670 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CDH12P55289 794 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 PLP2Q04941 152 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 SCARB2Q14108 478 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 MBTPS1Q14703 1052 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 PTGES3Q15185 160 aaKnown RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 FLYWCH1Q4VC44 716 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 AHSA2Q719I0 299 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 PRRX2Q99811 253 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 BOCQ9BWV1 1114 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 KLHL31Q9H511 634 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 MEAF6Q9HAF1 191 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 OBP2AQ9NY56 170 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 NME6O75414 186 aaPredicted RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 STX11O75558 287 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CXCL10P02778 98 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 NUDT17P0C025 328 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 HSD11B1P28845 292 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 TNFRSF8P28908 595 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 FMO3P31513 532 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 EPHA4P54764 986 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 ZNF662Q6ZS27 426 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
SIX4-201ENST00000216513 RPH3AQ9Y2J0 694 aaPredicted RBP13.23□□□□□ -0.29
SIX4-201ENST00000216513 C4orf47A7E2U8 309 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 ERCC1P07992 297 aaPredicted RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 ZNF28P17035 718 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 DSTNP60981 165 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 LIPEQ05469 1076 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 LIPIQ6XZB0 460 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 LINC00696Q6ZRV3 163 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 GRHL1Q9NZI5 618 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 A0A0A6YYC8 382 aaPredicted RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 I3L1I5 382 aaPredicted RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 ZNF208O43345 1280 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 MBTPS2O43462 519 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 FABP3P05413 133 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 DBIP07108 87 aaKnown RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 C4BPBP20851 252 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 POU6F2P78424 691 aaPredicted RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 ADGRE1Q14246 886 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 KHDC1Q4VXA5 237 aaKnown RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 NPWQ8N729 165 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 OR8K5Q8NH50 307 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 SGK494L7N484 410 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 PDLIM1O00151 329 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 SIGLEC6O43699 453 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 ABLIM3O94929 683 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 CCT3P49368 545 aaKnown RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 DGKQP52824 942 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 TGFBIQ15582 683 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 MPP7Q5T2T1 576 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 DEFB124Q8NES8 71 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 OR5T3Q8NGG3 340 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 GINS4Q9BRT9 223 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 RPF2Q9H7B2 306 aaKnown RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 MOCS1Q9NZB8 636 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 ZNF180Q9UJW8 692 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 BLOC1S5-TXNDC5H3BN57 136 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 PRPS1L1P21108 318 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 S100GP29377 79 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 CLRN1P58418 232 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 KCNC3Q14003 757 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 DRICH1Q6PGQ1 229 aaPredicted RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 OR13H1Q8NG92 308 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 AGTR2P50052 363 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 RRADP55042 308 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 HADHBP55084 474 aaKnown RBP13.22□□□□□ -0.29
SIX4-201ENST00000216513 MLLT10P55197 1068 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms