RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Eml4Q3UMY5 988 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 H2-Eb2Q3UUV9 287 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 SnrpaQ62189 287 aaKnown RBP11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Fam189a1Q6A044 515 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Dennd2cQ6P9P8 914 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rexo4Q6PAQ4 432 aaKnown RBP11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Sort1Q6PHU5 825 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Carns1Q6ZPS2 827 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Mppe1Q80XL7 396 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Cpt1cQ8BGD5 798 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Atg4dQ8BGV9 474 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 NracQ8BNX7 165 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Fam180aQ8BR21 173 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Sp110Q8BVK9 445 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tns4Q8BZ33 696 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Q8C3W1 322 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Erich5Q8K0S2 362 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Cdkal1Q91WE6 578 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Siglec5Q920G3 569 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tmco1Q921L3 188 aaKnown RBP11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Yipf2Q99LP8 312 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Trim16Q99PP9 556 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Uqcc2Q9CQY6 136 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Trmt5Q9D0C4 501 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Exosc7Q9D0M0 291 aaKnown RBP11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 ToporslQ9D2F8 683 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Glod5Q9D8I3 148 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 CalyQ9DCA7 226 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Aldh6a1Q9EQ20 535 aaKnown RBP11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Hes6Q9JHE6 224 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ccr10Q9JL21 362 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Spag6Q9JLI7 507 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Chst11Q9JME2 352 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 RhagQ9QUT0 438 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Smok2bQ9QYZ3 484 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Smok2aQ9QYZ6 504 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 FarsbQ9WUA2 589 aaKnown RBP11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Zscan12Q9Z1D7 501 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Speer3W4VSP1 261 aa11.49□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rpl7a-ps3A0A140T8L1 270 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Gm36864A0A1Y7VJE6 447 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 4932443I19RikA0A286YE38 169 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rhox2cA2AWL9 191 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Serpinb3cA2RSF9 386 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Clip3B9EHT4 547 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 TmppeD3Z286 447 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Mkrn2osD3Z393 217 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Vmn2r74E9PW21 853 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Samd15F6XZJ7 620 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Olfr596F8VQ26 312 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Vmn2r3H3BJ88 915 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Vmn2r6H3BK29 913 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Vmn2r46L7N282 809 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 E2f3O35261 457 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Prl8a2O54832 240 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ap1g2O88512 791 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 PdgfaP20033 211 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ido1P28776 407 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 ItgadQ3V0T4 1168 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pacs2Q3V3Q7 862 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Taok1Q5F2E8 1001 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 UnklQ5FWH2 727 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Gpr39Q5U431 456 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Olfr10Q60883 311 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Birc2Q62210 612 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Zic2Q62520 530 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Eif2s1Q6ZWX6 315 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 SetmarQ80UJ9 309 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 AftphQ80WT5 931 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rbm45Q8BHN5 476 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Zc3h14Q8BJ05 735 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Cpsf4Q8BQZ5 211 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tlk1Q8C0V0 766 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Samd4aQ8CBY1 711 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Wdr47Q8CGF6 920 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pih1d2Q8CHR9 315 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Slc16a14Q8K1C7 512 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tmprss3Q8K1T0 453 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Olfr850Q8VFF2 315 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Olfr352Q8VGJ9 315 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Chp2Q9D869 196 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Lrrc34Q9DAM1 415 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Lhx6Q9R1R0 363 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 TfecQ9WTW4 317 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Dyrk1bQ9Z188 629 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Slc22a4Q9Z306 553 aa11.48□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Col7a1Q63870 2944 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Muc2Q80Z19 2680 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Igkv4-86A0A0G2JGE7 114 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Cd163l1A0A1B0GSB0 991 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Gm12666A2AMD0 254 aaKnown RBP11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Klrg1O88713 188 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Adra2bP30545 450 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rbp1Q00915 135 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Slc17a7Q3TXX4 560 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Mettl17Q3U2U7 461 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rsrp1Q3UC65 298 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Irgm1Q60766 409 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Fzd7Q61090 572 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Hif1aQ61221 836 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms