RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Nt5c3bQ3UFY7 300 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Rbm38Q62176 237 aaKnown RBP14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Yipf6Q8BR70 236 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Cnot2Q8C5L3 540 aaKnown RBP14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Ftsj1Q8CBC7 324 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Teddm1bQ8CC62 306 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 D2hgdhQ8CIM3 535 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Tnfaip8l1Q8K288 186 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 FlcnQ8QZS3 579 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Rnf121Q8R1Z9 327 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Glis2Q8VDL9 521 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Mtmr14Q8VEL2 648 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Satb2Q8VI24 733 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Fuca2Q99KR8 461 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Trhr2Q9ERT2 382 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 PrelpQ9JK53 378 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Pole3Q9JKP7 145 aa14.26□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Trbv20A0A0B4J1H5 111 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn2r118E9Q1C1 853 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 5830473C10RikF8VQ07 620 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm16440K7N6G6 218 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 H2al1oL7MU04 110 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm8271L7N2E2 218 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 PbsnO08976 174 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Man2a1P27046 1150 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Cav3P51637 151 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 PrtgQ2EY15 1191 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Armc5Q5EBP3 926 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Tas2r39Q7TQA5 319 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Slco4c1Q8BGD4 722 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Pomt2Q8BGQ4 820 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Zfp595Q8BIN6 625 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Acp6Q8BP40 418 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Ppm1fQ8CGA0 452 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Taf10Q8K0H5 218 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 SdslQ8R238 329 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Elmod3Q91YP6 381 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Prl8a9Q9CQ58 241 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Zswim7Q9CWQ2 152 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gtf2h2Q9JIB4 396 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Serpini2Q9JK88 405 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Ptges3Q9R0Q7 160 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Scgb2b17S4R2V3 82 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Baz2bA2AUY4 2123 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm14147A2AQX6 640 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 PpigA2AR02 752 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Ankrd16A2AS55 361 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn2r22E9Q7S8 853 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn1r58G3X9U3 310 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn2r6H3BK29 913 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 HbaP01942 142 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 CcnoP0C242 352 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Rps24P62849 133 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Pde7aP70453 456 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Pou4f2Q63934 411 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Tmem151bQ68FE7 561 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Tmem270Q6UJB9 264 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 IlvblQ8BU33 632 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Sh3rf2Q8BZT2 735 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Bpifb2Q8C1E1 462 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gatad2aQ8CHY6 629 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 TrhdeQ8K093 1025 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 MfrpQ8K480 584 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn1r234Q8R298 329 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Slco3a1Q8R3L5 710 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Rbm47Q91WT8 590 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Mrgpra2Q91WW4 305 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Coro6Q920M5 471 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Glyr1Q922P9 546 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Use1Q9CQ56 270 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Pak1ip1Q9DCE5 382 aaKnown RBP14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn1r49Q9WUF1 310 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm17190V9GX38 357 aa14.25□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Nt5c1aA3KFX0 365 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm13212B1ASQ7 799 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm10718D3Z1I7 227 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Fam46aD3Z5S8 447 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 MaxP28574 160 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Hoxc5P32043 222 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Ccdc61Q3UJV1 511 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Laptm4aQ60961 233 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Itln1bQ80ZA0 313 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 CenpvQ9CXS4 252 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Elp3Q9CZX0 547 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Msgn1Q9JK54 188 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Kif26aQ52KG5 1881 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 1700001O22RikA2APZ1 375 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Fpr-rs4A4FUQ5 323 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Zfp472B0V2W5 534 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn2r106E9PY92 862 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Vmn2r94E9PZK8 818 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm5152L7N200 190 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Nkx3-2P97503 333 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gm45902Q3UDN3 361 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Nfe2l2Q60795 597 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Pwwp2aQ69Z61 730 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 ZfatQ7TS63 1237 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Zc3h14Q8BJ05 735 aaKnown RBP14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Palm2Q8BR92 376 aa14.24□□□□□ -0.13
Ushbp1-201ENSMUST00000049184 Gjd4Q8BSD4 364 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms