RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ADAMTS20P59510 1910 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 GNG14A0A1W2PPG7 69 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 HYKKA2RU49 373 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 C4orf51C9J302 202 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 NPIPB8E9PQR5 432 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 HYAL3O43820 417 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 PCDH7O60245 1069 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 B3GALT4O96024 378 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 KLK1P06870 262 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 ALDOCP09972 364 aaKnown RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 MAPK1P28482 360 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 BTN3A2P78410 334 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 KIAA0040Q15053 153 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 NDUFA9Q16795 377 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 PRTGQ2VWP7 1150 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 DEFB134Q4QY38 66 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 OGFOD2Q6N063 350 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 NOXRED1Q6NXP6 359 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 ABHD17CQ6PCB6 329 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 PAGE2Q7Z2X7 111 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 UBE3DQ7Z6J8 389 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 RARRES3Q9UL19 164 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 MRPS2Q9Y399 296 aaKnown RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 ALOX12P18054 663 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 IL1RNP18510 177 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 TIA1P31483 386 aaKnown RBP eCLIP16.61■□□□□ 0.25
PHGDH-230ENST00000641927 BSGP35613 385 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 DIO3P55073 304 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 RSPO4Q2I0M5 234 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-230ENST00000641927 CCNYL2Q5T2Q4 361 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 METTL21CQ5VZV1 264 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 MTDHQ86UE4 582 aaKnown RBP16.61■□□□□ 0.25
PHGDH-230ENST00000641927 OR8K5Q8NH50 307 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 CDC26Q8NHZ8 85 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 METTL2AQ96IZ6 378 aaKnown RBP16.61■□□□□ 0.25
PHGDH-230ENST00000641927 QRFPRQ96P65 431 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 TBCDQ9BTW9 1192 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 NDC1Q9BTX1 674 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 SLC7A5P2Q9GIP4 190 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 SIDT1Q9NXL6 827 aaKnown RBP16.61■□□□□ 0.25
PHGDH-230ENST00000641927 DLGAP4Q9Y2H0 992 aa16.61■□□□□ 0.25
PHGDH-230ENST00000641927 A0A088AWK7 358 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 EEDO75530 441 aaKnown RBP16.6■□□□□ 0.25
PHGDH-230ENST00000641927 ANXA4P09525 319 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-230ENST00000641927 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 CCL4P13236 92 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF10P21506 573 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-230ENST00000641927 NME5P56597 212 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 STX1BP61266 288 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 RAE1P78406 368 aaKnown RBP16.6■□□□□ 0.25
PHGDH-230ENST00000641927 HERC3Q15034 1050 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 SMU1Q2TAY7 513 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 PRAMEF17Q5VTA0 474 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 TLDC1Q6P9B6 456 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 CYB5D1Q6P9G0 228 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 CYP20A1Q6UW02 462 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 PPP1R3BQ86XI6 285 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 TMEM126BQ8IUX1 230 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 LIX1Q8N485 282 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 RNF31Q96EP0 1072 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 TEFMQ96QE5 360 aaKnown RBP16.6■□□□□ 0.25
PHGDH-230ENST00000641927 CTRCQ99895 268 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 ANKHQ9HCJ1 492 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 LHX9Q9NQ69 397 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 PRDM7Q9NQW5 492 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 LOXL2Q9Y4K0 774 aa16.6■□□□□ 0.25
PHGDH-230ENST00000641927 COL27A1Q8IZC6 1860 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 FITM1A5D6W6 292 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 POLR1CO15160 346 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF749O43361 778 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 CCDC22O60826 627 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 DCTN3O75935 186 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 KCNK5O95279 499 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 G6PDP11413 515 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 BCKDHAP12694 445 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 IDO1P14902 403 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 HIST1H1TP22492 207 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ALAS2P22557 587 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 CERS1P27544 350 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 SNRPNP63162 240 aaKnown RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 MUM1Q2TAK8 710 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 FAM214AQ32MH5 1076 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 FOXR1Q6PIV2 292 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF793Q6ZN11 406 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 RIPOR1Q6ZS17 1223 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 TTLL10Q6ZVT0 673 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 RAB11FIP2Q7L804 512 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 PRSS41Q7RTY9 318 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ACOT4Q8N9L9 421 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 CLHC1Q8NHS4 586 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 C10orf90Q96M02 699 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF717Q9BY31 904 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ROGDIQ9GZN7 287 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 NMUR2Q9GZQ4 415 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 APMAPQ9HDC9 416 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 CUTCQ9NTM9 273 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 NDOR1Q9UHB4 597 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 BAIAP2L1Q9UHR4 511 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms