RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MYBPC1Q00872 1141 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 CYP4F3Q08477 520 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 LSAMPQ13449 338 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 TEAD4Q15561 434 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 KIAA1614Q5VZ46 1190 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 DNAJC14Q6Y2X3 702 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-219ENST00000641513 COMMD6Q7Z4G1 85 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SPRED1Q7Z699 444 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 TRIM73Q86UV7 250 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 IQCHQ86VS3 1027 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SFTPA2Q8IWL1 248 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 ADGRF3Q8IZF5 1079 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 FBXL6Q8N531 539 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 FAM156AQ8NDB6 213 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 TRPV3Q8NET8 790 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 OR7A2PQ8NGA2 310 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 OR4K1Q8NGD4 311 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 OR8J3Q8NGG0 315 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 ADAMTS16Q8TE57 1224 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SLC13A3Q8WWT9 602 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SLC22A18Q96BI1 424 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 METTL2AQ96IZ6 378 aaKnown RBP8.47□□□□□ -1.05
PHGDH-219ENST00000641513 EGLN2Q96KS0 407 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 PPM1MQ96MI6 270 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 F2RL3Q96RI0 385 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SORBS1Q9BX66 1292 aaKnown RBP8.47□□□□□ -1.05
PHGDH-219ENST00000641513 PITHD1Q9GZP4 211 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-219ENST00000641513 RHBGQ9H310 441 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 RMND5AQ9H871 391 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SLC6A20Q9NP91 592 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 TMEM184CQ9NVA4 438 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 CMTM6Q9NX76 183 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 ACTR10Q9NZ32 417 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-219ENST00000641513 ZNF639Q9UID6 485 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 MAGEL2Q9UJ55 1249 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SNX7Q9UNH6 387 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 MAPRE3Q9UPY8 281 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 SSUH2Q9Y2M2 353 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 TRIOO75962 3097 aa8.47□□□□□ -1.05
PHGDH-219ENST00000641513 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
PHGDH-219ENST00000641513 TCRBV5S2A0A599 114 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 C2orf74A8MZ97 194 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 PDLIM1O00151 329 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ARPC2O15144 300 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 AQP9O43315 295 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 PRICKLE3O43900 615 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 LCMT2O60294 686 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 PRMT3O60678 531 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 SDC3O75056 442 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 RASAL1O95294 804 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 BMP10O95393 424 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 H6PDO95479 791 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 CPSF4O95639 269 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ANXA6P08133 673 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 NME1P15531 152 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 UGT2B7P16662 529 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 MYF6P23409 242 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 HRH2P25021 359 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 FASP25445 335 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 BCL6P41182 706 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 KIR3DL1P43629 444 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ALDH3B2P48448 385 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 CCT8P50990 548 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 AFF3P51826 1226 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 MAZP56270 477 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 NXPH1P58417 271 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 HNRNPKP61978 463 aaKnown RBP eCLIP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 UBE2IP63279 158 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 HHEXQ03014 270 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 CSTF1Q05048 431 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 SRSF11Q05519 484 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ZNF763Q0D2J5 394 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 C2orf80Q0P641 193 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 PWP1Q13610 501 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 KIR2DS3Q14952 304 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ATP6AP1Q15904 470 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 C11orf91Q3C1V1 193 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 NHSL2Q5HYW2 709 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 TJAP1Q5JTD0 557 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 TOR1AIP1Q5JTV8 583 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 CCNYL2Q5T2Q4 361 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 CPTPQ5TA50 214 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 KHDRBS2Q5VWX1 349 aaKnown RBP8.46□□□□□ -1.06
PHGDH-219ENST00000641513 OR4F3Q6IEY1 312 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ANKRD26P1Q6NSI1 321 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 HMBOX1Q6NT76 420 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 MSANTD1Q6ZTZ1 278 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 TMEM26Q6ZUK4 368 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 PAGE2Q7Z2X7 111 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 VN1R5Q7Z5H4 357 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 GPR180Q86V85 440 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ANKRD46Q86W74 232 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 IFNEQ86WN2 208 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 OOSP2Q86WS3 158 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 ADGRG5Q8IZF4 528 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 NAGSQ8N159 534 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 METTL4Q8N3J2 472 aa8.46□□□□□ -1.06
PHGDH-219ENST00000641513 TMEM132CQ8N3T6 1108 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms