RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 ARHGEF15O94989 841 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 IGHA2P01877 340 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 ZNF865P0CJ78 1059 aaPredicted RBP19.68■□□□□ 0.74
PMS1-222ENST00000639501 CNR2P34972 360 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 ARPP19P56211 112 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 NKX3-2P78367 333 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 RING1Q06587 406 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 MAP2K5Q13163 448 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 LARS2Q15031 903 aaKnown RBP19.68■□□□□ 0.74
PMS1-222ENST00000639501 SLC35F1Q5T1Q4 408 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 SAXO2Q658L1 398 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 NCEH1Q6PIU2 408 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 ZNF852Q6ZMS4 543 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 C16orf59Q7L2K0 433 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 FAM109AQ8N4B1 249 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 FAM181AQ8N9Y4 354 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 OR6K2Q8NGY2 324 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 MAP6Q96JE9 813 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 TTLL2Q9BWV7 592 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 GON7Q9BXV9 100 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 PADI3Q9ULW8 664 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 MYADML2A6NDP7 307 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 SMLR1H3BR10 107 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 SH3BGRLO75368 114 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 RHOCP08134 193 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 IFI30P13284 250 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 PCGF2P35227 344 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 PURAQ00577 322 aaKnown RBP19.68■□□□□ 0.74
PMS1-222ENST00000639501 SRSF11Q05519 484 aaKnown RBP19.68■□□□□ 0.74
PMS1-222ENST00000639501 GANABQ14697 944 aaKnown RBP19.68■□□□□ 0.74
PMS1-222ENST00000639501 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.68■□□□□ 0.74
PMS1-222ENST00000639501 HKDC1Q2TB90 917 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 PAQR6Q6TCH4 344 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 PTCHD4Q6ZW05 846 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 FAM9CQ8IZT9 166 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 OR8J2Q8NGG1 315 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 IL26Q9NPH9 171 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 CNOT2Q9NZN8 540 aaKnown RBP19.68■□□□□ 0.74
PMS1-222ENST00000639501 FTSJ1Q9UET6 329 aa19.68■□□□□ 0.74
PMS1-222ENST00000639501 ZNF670-ZNF695F2Z2N8 137 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 ACSL4O60488 711 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 ENTPD6O75354 484 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 ITPKAP23677 461 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 CHMP24386 653 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 FEN1P39748 380 aaKnown RBP19.67■□□□□ 0.74
PMS1-222ENST00000639501 ZNF557Q8N988 423 aaPredicted RBP19.67■□□□□ 0.74
PMS1-222ENST00000639501 CSGALNACT1Q8TDX6 532 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 GPATCH2Q9NW75 528 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 FAM120CQ9NX05 1096 aaKnown RBP19.67■□□□□ 0.74
PMS1-222ENST00000639501 A8MX80 341 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 PLD2O14939 933 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 HBQ1P09105 142 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 ACRV1P26436 265 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 POU1F1P28069 291 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 GPC1P35052 558 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 CPT1AP50416 773 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 CDH4P55283 916 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 CDC42P60953 191 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 GGTA1PQ4G0N0 100 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 FRG2Q64ET8 278 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 GDF6Q6KF10 455 aaPredicted RBP19.67■□□□□ 0.74
PMS1-222ENST00000639501 KLHL17Q6TDP4 642 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 CHTF18Q8WVB6 975 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 FRG2BQ96QU4 278 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 C11orf16Q9NQ32 467 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 RHCGQ9UBD6 479 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 DNMT3AQ9Y6K1 912 aaPredicted RBP19.67■□□□□ 0.74
PMS1-222ENST00000639501 SCN8AQ9UQD0 1980 aa19.67■□□□□ 0.74
PMS1-222ENST00000639501 FZD6O60353 706 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 ETFAP13804 333 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 NAT1P18440 290 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 ATF6P18850 670 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 CTGFP29279 349 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.66■□□□□ 0.74
PMS1-222ENST00000639501 DGKKQ5KSL6 1271 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 ANGPTL8Q6UXH0 198 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 LAS2Q8IYD9 372 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 FUBP3Q96I24 572 aaKnown RBP eCLIP19.66■□□□□ 0.74
PMS1-222ENST00000639501 FCRL1Q96LA6 429 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 TCF25Q9BQ70 676 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 DUSP26Q9BV47 211 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 MKRN2Q9H000 416 aaKnown RBP19.66■□□□□ 0.74
PMS1-222ENST00000639501 LHX3Q9UBR4 397 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 SLC22A14Q9Y267 594 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 IQCMA0A1B0GVH7 501 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 ZAR1LA6NP61 321 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 CDRT1O95170 752 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 CHRM5P08912 532 aaPredicted RBP19.66■□□□□ 0.74
PMS1-222ENST00000639501 CD22P20273 847 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 AOAHP28039 575 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 NFE2Q16621 373 aaPredicted RBP19.66■□□□□ 0.74
PMS1-222ENST00000639501 CCL14Q16627 93 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 LEXMQ3ZCV2 418 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 METTL2BQ6P1Q9 378 aaKnown RBP19.66■□□□□ 0.74
PMS1-222ENST00000639501 BCDIN3DQ7Z5W3 292 aaKnown RBP19.66■□□□□ 0.74
PMS1-222ENST00000639501 DENND1CQ8IV53 801 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 CCDC28AQ8IWP9 274 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 TCTE3Q8IZS6 198 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 SLC34A3Q8N130 599 aa19.66■□□□□ 0.74
PMS1-222ENST00000639501 AQP11Q8NBQ7 271 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms