RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 LHX3Q9UBR4 397 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 C19orf25Q9UFG5 118 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-215ENST00000639145 CENPXA8MT69 81 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-215ENST00000639145 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCARB2-215ENST00000639145 CDK3Q00526 305 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 DPPA4Q7L190 304 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 ZNF433Q8N7K0 673 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-215ENST00000639145 OR56A1Q8NGH5 318 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 CAMK1GQ96NX5 476 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 STOX2Q9P2F5 926 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-215ENST00000639145 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
SCARB2-215ENST00000639145 MATN1P21941 496 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 MTTPP55157 894 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 SH3BP2P78314 561 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 LYSMD4Q5XG99 296 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 DENND1AQ8TEH3 1009 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 NUP205Q92621 2012 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 TLX3O43711 291 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 RNH1P13489 461 aaKnown RBP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 TTKP33981 857 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 RPL5P46777 297 aaKnown RBP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 COX10Q12887 443 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 ATP1A4Q13733 1029 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 C11orf88Q6PI97 169 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 FAM180AQ6UWF9 173 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 LGI4Q8N135 537 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 PTERQ96BW5 349 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 THUMPD1Q9NXG2 353 aaKnown RBP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 MS4A12Q9NXJ0 267 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 RARRES3Q9UL19 164 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 MAU2Q9Y6X3 613 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 EP300Q09472 2414 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 LOC285095A0A1B0GVY8 99 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 KLHL33A6NCF5 533 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 E7EQ34 232 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 MGRN1O60291 552 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 TMCC2O75069 709 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 AGR2O95994 175 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 NR4A1P22736 598 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 CTHP32929 405 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 IRF4Q15306 451 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 LNX2Q8N448 690 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 OR10G2Q8NGC3 310 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 IL4I1Q96RQ9 567 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 DNAJC15Q9Y5T4 150 aa13.1□□□□□ -0.31
SCARB2-215ENST00000639145 RIF1Q5UIP0 2472 aaKnown RBP13.1□□□□□ -0.31
SCARB2-215ENST00000639145 PSMD11O00231 422 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 CSNK1EP49674 416 aaKnown RBP13.09□□□□□ -0.31
SCARB2-215ENST00000639145 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 DNAJA3Q96EY1 480 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 PEX11GQ96HA9 241 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 ZSWIM3Q96MP5 696 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 GORASP1Q9BQQ3 440 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 SPRTNQ9H040 489 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-215ENST00000639145 SERINC1Q9NRX5 453 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 C5AR2Q9P296 337 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 SSR3Q9UNL2 185 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 DFNA5O60443 496 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 CXCL10P02778 98 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 HRH2P25021 359 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 PDHA2P29803 388 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 CTBSQ01459 385 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 LAPTM4AQ15012 233 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 TRIM71Q2Q1W2 868 aaKnown RBP13.09□□□□□ -0.31
SCARB2-215ENST00000639145 GFOD2Q3B7J2 385 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 PNCKQ6P2M8 343 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 KLHDC8AQ8IYD2 350 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 TMIEQ8NEW7 156 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 KCNN2Q9H2S1 579 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 OAZ3Q9UMX2 235 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 HS3ST2Q9Y278 367 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 AQP12BA6NM10 295 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 B4GALT3O60512 393 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 AOC1P19801 751 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 CD38P28907 300 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 ACTR3P61158 418 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 MRPS21P82921 87 aaKnown RBP13.09□□□□□ -0.31
SCARB2-215ENST00000639145 RHAGQ02094 409 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 FRRS1Q6ZNA5 592 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 AQP12AQ8IXF9 295 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 OR13J1Q8NGT2 312 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
SCARB2-215ENST00000639145 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms