RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 RGS7BPQ6MZT1 257 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 GPR153Q6NV75 609 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 GCNT7Q6ZNI0 430 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 RNF180Q86T96 592 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 GLCCI1Q86VQ1 547 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 FATE1Q969F0 183 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 PHF21AQ96BD5 680 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF419Q96HQ0 510 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-221ENST00000638141 OR2M2Q96R28 347 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 MYOCQ99972 504 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 TMEM175Q9BSA9 504 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 DUSP16Q9BY84 665 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 AMBNQ9NP70 447 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 CD93Q9NPY3 652 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 TMCC3Q9ULS5 477 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 POFUT2Q9Y2G5 429 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 LCTP09848 1927 aa11.57□□□□□ -0.56
CAPN3-221ENST00000638141 A0A0B4J203 849 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 ZBTB42B2RXF5 422 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 H3BM21 787 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 DNASE2O00115 360 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 SIGLEC6O43699 453 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 DHFRP00374 187 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 FGF2P09038 288 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 CTPS1P17812 591 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 MEOX2P50222 304 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 NUDT6P53370 316 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 TIAL1Q01085 375 aaKnown RBP eCLIP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 GRM7Q14831 915 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 RBBP7Q16576 425 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 AMHR2Q16671 573 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 FCRLBQ6BAA4 426 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 MRNIPQ6NTE8 343 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 FIP1L1Q6UN15 594 aaKnown RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 USP45Q70EL2 814 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 PIM3Q86V86 326 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 OR11H7Q8NGC8 314 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 OR8D4Q8NGM9 314 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 TMEM163Q8TC26 289 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 GFM1Q96RP9 751 aaKnown RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 SEC22CQ9BRL7 303 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 AARSD1Q9BTE6 412 aaKnown RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 PDCD11Q14690 1871 aaKnown RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 ALPK3Q96L96 1907 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 PHIPQ8WWQ0 1821 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 TPST2O60704 377 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 ECDO95905 644 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 PRDX3P30048 256 aaKnown RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF81P51508 661 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 VLDLRP98155 873 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 MLLT11Q13015 90 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 CAMK2DQ13557 499 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 IQCCQ4KMZ1 466 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 MEDAGQ5VYS4 303 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 METTL7BQ6UX53 244 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 SERPINA11Q86U17 422 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 UBE2J2Q8N2K1 259 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 OR4D10Q8NGI6 311 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 OR9Q1Q8NGQ5 310 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 CEP76Q8TAP6 659 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 SIPA1Q96FS4 1042 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 SLC25A51Q9H1U9 297 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 RSPH9Q9H1X1 276 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 OSER1Q9NX31 292 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 DCAF16Q9NXF7 216 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 NDRG3Q9UGV2 375 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 MAFFQ9ULX9 164 aa11.56□□□□□ -0.56
CAPN3-221ENST00000638141 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-221ENST00000638141 FGF10O15520 208 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MMP20O60882 483 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ECI2O75521 394 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ANXA8P13928 327 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CXCR3P49682 368 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 HK3P52790 923 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ATP12AP54707 1039 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 WNT3AP56704 352 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SSTP61278 116 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 TNFAIP1Q13829 316 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 TSNQ15631 228 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 NBPF12Q5TAG4 269 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MSANTD1Q6ZTZ1 278 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CBLL1Q75N03 491 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 KRT74Q7RTS7 529 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 TMEM130Q8N3G9 435 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 NKAPQ8N5F7 415 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 WDR36Q8NI36 951 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 FUBP1Q96AE4 644 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 KCNC2Q96PR1 638 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CCM2Q9BSQ5 444 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CLMPQ9H6B4 373 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MS4A12Q9NXJ0 267 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms