RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CAMKVQ8NCB2 501 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 GLB1L3Q8NCI6 653 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 SRFBP1Q8NEF9 429 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 FAM162AQ96A26 154 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 LINC00615Q96LM1 132 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 RBM38Q9H0Z9 239 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 EPB41L1Q9H4G0 881 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 KIR3DX1Q9H7L2 352 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 HELZP42694 1942 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 HNRNPRO43390 633 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ERI3O43414 337 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 FOXD2O60548 495 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 IFNA16P05015 189 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 KIR2DS3Q14952 304 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 MLIPQ5VWP3 458 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC35F3Q8IY50 421 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 METTL27Q8N6F8 245 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 PDLIM5Q96HC4 596 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 SCHIP1Q9P0W5 487 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 PCTPQ9UKL6 214 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 AP4B1Q9Y6B7 739 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ERAL1O75616 437 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ABATP80404 500 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 MAPKAPK3Q16644 382 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 OGFOD2Q6N063 350 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ABRAXAS1Q6UWZ7 409 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 PROSER1Q86XN7 944 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 BDH2Q9BUT1 245 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 C9orf16Q9BUW7 83 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CAAP1Q9H8G2 361 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CMTM6Q9NX76 183 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 FAM234BA2RU67 622 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 E2F3O00716 465 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR2B3O76000 313 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 C1GALT1C1LP0DN25 315 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 PEX19P40855 299 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 HMGCS1Q01581 520 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 DOC2AQ14183 400 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 FAM98BQ52LJ0 330 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 CATSPEREQ5SY80 951 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 FRG2Q64ET8 278 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 SYVN1Q86TM6 617 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 GPBAR1Q8TDU6 330 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 LRTOMTQ8WZ04 291 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 MAGED4Q96JG8 741 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 FRG2BQ96QU4 278 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC29A1Q99808 456 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 UGT2B28Q9BY64 529 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 ANKHQ9HCJ1 492 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 TMEM45AQ9NWC5 275 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 NLGN3Q9NZ94 848 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 FBXW2Q9UKT8 454 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 PNMA8BQ9ULN7 279 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 PCDHA9Q9Y5H5 950 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 TRANK1O15050 2925 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 GUCY1B2O75343 617 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 DEAF1O75398 565 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 CPNE6O95741 557 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 CCNYL2Q5T2Q4 361 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 C6orf52Q5T4I8 152 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 METTL2BQ6P1Q9 378 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 NAGSQ8N159 534 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 TMEM132CQ8N3T6 1108 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 TTLQ8NG68 377 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR52B6Q8NGF0 335 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 FAM120BQ96EK7 910 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC29A3Q9BZD2 475 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR51B5Q9H339 312 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZNF696Q9H7X3 374 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 LRTM1Q9HBL6 345 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 ANAPC2Q9UJX6 822 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 PIKFYVEQ9Y2I7 2098 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 GFRA3O60609 400 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 LRATO95237 230 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 LDLRP01130 860 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 PRPS2P11908 318 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 GLB1P16278 677 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC6A2P23975 617 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 IMPA1P29218 277 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 DIO3P55073 304 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 GUSBP11Q6P575 273 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 BLOC1S3Q6QNY0 202 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 CYP2R1Q6VVX0 501 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC15A3Q8IY34 581 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 DNAJB8Q8NHS0 232 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 CLHC1Q8NHS4 586 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 NRBF2Q96F24 287 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 TSSK3Q96PN8 268 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 MAP3K3Q99759 626 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 KLF15Q9UIH9 416 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 RARRES3Q9UL19 164 aa11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZFC3H1O60293 1989 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-207ENST00000628646 MYOCOSA0A1B0GUC4 107 aa11.92□□□□□ -0.5
SYNGAP1-207ENST00000628646 TMEM247A6NEH6 219 aa11.92□□□□□ -0.5
SYNGAP1-207ENST00000628646 E7EQ34 232 aa11.92□□□□□ -0.5
SYNGAP1-207ENST00000628646 H0YJX3 145 aa11.92□□□□□ -0.5
SYNGAP1-207ENST00000628646 DYRK3O43781 588 aa11.92□□□□□ -0.5
SYNGAP1-207ENST00000628646 NPPAP01160 153 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms