RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 RDH16O75452 317 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 PRKAR1AP10644 381 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 PIK3CBP42338 1070 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 NAGLUP54802 743 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 RAB8AP61006 207 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 PHEXP78562 749 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 MAT1AQ00266 395 aaKnown RBP19.23■□□□□ 0.67
PTCD3-220ENST00000627371 LCP2Q13094 533 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 ZRSR2Q15696 482 aaKnown RBP19.23■□□□□ 0.67
PTCD3-220ENST00000627371 SYT16Q17RD7 645 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 LETMD1Q6P1Q0 360 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 C10orf107Q8IVU9 208 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 CCNYL1Q8N7R7 359 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 OR2L5Q8NG80 312 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 WDR20Q8TBZ3 569 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 STT3BQ8TCJ2 826 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 DMRT3Q9NQL9 472 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 C14orf105Q9NVL8 296 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 TRPS1Q9UHF7 1281 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 ZNF225Q9UK10 706 aa19.23■□□□□ 0.67
PTCD3-220ENST00000627371 ZNF860A6NHJ4 632 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 GOLGA6L10A6NI86 522 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 FFAR3O14843 346 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 GPR42O15529 346 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 ERI3O43414 337 aaKnown RBP19.22■□□□□ 0.67
PTCD3-220ENST00000627371 B3GALT4O96024 378 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 FURINP09958 794 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 ZGLP1P0C6A0 271 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 FOXL2P58012 376 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 DDX39BQ13838 428 aaKnown RBP19.22■□□□□ 0.67
PTCD3-220ENST00000627371 VWA2Q5GFL6 755 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 C10orf62Q5T681 223 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-220ENST00000627371 ATP1A1-AS1Q5TC04 95 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 TRIM40Q6P9F5 258 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 FRMD7Q6ZUT3 714 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 ADAMTS17Q8TE56 1095 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 MIEF2Q96C03 454 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 CMTM7Q96FZ5 175 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 CATSPER2Q96P56 530 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 YIPF2Q9BWQ6 316 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 TGIF2Q9GZN2 237 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 SOX17Q9H6I2 414 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-220ENST00000627371 TMBIM4Q9HC24 238 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 PRM3Q9NNZ6 103 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 HCN3Q9P1Z3 774 aa19.22■□□□□ 0.67
PTCD3-220ENST00000627371 CDC14CA4D256 554 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 TRIM13O60858 407 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 OR4F21O95013 312 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 TGFB1P01137 390 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 UMODP07911 640 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 ETV4P43268 484 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 PKNOX1P55347 436 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 TGM3Q08188 693 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 SSPNQ14714 243 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 TMEM35AQ53FP2 167 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 CFAP157Q5JU67 520 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 FRG2Q64ET8 278 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 ABHD17CQ6PCB6 329 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 GPRIN3Q6ZVF9 776 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 TMEM151BQ8IW70 566 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 ZC3H7AQ8IWR0 971 aaKnown RBP19.21■□□□□ 0.67
PTCD3-220ENST00000627371 RNF175Q8N4F7 328 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 SRFBP1Q8NEF9 429 aaKnown RBP19.21■□□□□ 0.67
PTCD3-220ENST00000627371 OR51Q1Q8NH59 317 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 FAR2Q96K12 515 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 FRG2BQ96QU4 278 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 F2RL3Q96RI0 385 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 MTERF1Q99551 399 aaKnown RBP19.21■□□□□ 0.67
PTCD3-220ENST00000627371 CLK4Q9HAZ1 481 aaKnown RBP19.21■□□□□ 0.67
PTCD3-220ENST00000627371 PPT2Q9UMR5 302 aa19.21■□□□□ 0.67
PTCD3-220ENST00000627371 CACNA1GO43497 2377 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 A0A088AWK7 358 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 MAGEB17A8MXT2 336 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 AGPSO00116 658 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 FOXE1O00358 373 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-220ENST00000627371 TM9SF1O15321 606 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 ZNF10P21506 573 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-220ENST00000627371 ALDH3A1P30838 453 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 PLA2G16P53816 162 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 RPS13P62277 151 aaKnown RBP19.2■□□□□ 0.66
PTCD3-220ENST00000627371 BTN3A2P78410 334 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 KLC1Q07866 573 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 ASPHQ12797 758 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 IFT88Q13099 833 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 KHDRBS2Q5VWX1 349 aaKnown RBP19.2■□□□□ 0.66
PTCD3-220ENST00000627371 TTC19Q6DKK2 380 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-220ENST00000627371 SHISA6Q6ZSJ9 500 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 CHSY3Q70JA7 882 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 HDXQ7Z353 690 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 RAB43Q86YS6 212 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 OR5T3Q8NGG3 340 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 AGAP11Q8TF27 550 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 THAP4Q8WY91 577 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 QRFPRQ96P65 431 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 KCNC2Q96PR1 638 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 MECRQ9BV79 373 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 ELOVL6Q9H5J4 265 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 PSD3Q9NYI0 1048 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 POLHQ9Y253 713 aa19.2■□□□□ 0.66
PTCD3-220ENST00000627371 PCSK5Q92824 1860 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms