RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 PDLIM5Q96HC4 596 aaKnown RBP8.82□□□□□ -1
CHD2-210ENST00000627200 FRMD6Q96NE9 622 aa8.82□□□□□ -1
CHD2-210ENST00000627200 PTCHD1Q96NR3 888 aa8.82□□□□□ -1
CHD2-210ENST00000627200 EGFL8Q99944 293 aa8.82□□□□□ -1
CHD2-210ENST00000627200 MCMBPQ9BTE3 642 aa8.82□□□□□ -1
CHD2-210ENST00000627200 FAM129AQ9BZQ8 928 aa8.82□□□□□ -1
CHD2-210ENST00000627200 CDCP1Q9H5V8 836 aa8.82□□□□□ -1
CHD2-210ENST00000627200 CAB39LQ9H9S4 337 aa8.82□□□□□ -1
CHD2-210ENST00000627200 PELI2Q9HAT8 420 aa8.82□□□□□ -1
CHD2-210ENST00000627200 NECTIN3Q9NQS3 549 aa8.82□□□□□ -1
CHD2-210ENST00000627200 ENTPD4Q9Y227 616 aa8.82□□□□□ -1
CHD2-210ENST00000627200 SNX24Q9Y343 169 aa8.82□□□□□ -1
CHD2-210ENST00000627200 DYRK1BQ9Y463 629 aa8.82□□□□□ -1
CHD2-210ENST00000627200 IGKV3D-11A0A0A0MRZ8 115 aa8.81□□□□□ -1
CHD2-210ENST00000627200 SAGE2PA6NJ88 616 aa8.81□□□□□ -1
CHD2-210ENST00000627200 EFCAB8A8MWE9 144 aa8.81□□□□□ -1
CHD2-210ENST00000627200 CXorf49A8MYA2 514 aaPredicted RBP8.81□□□□□ -1
CHD2-210ENST00000627200 NPIPA5E9PKD4 350 aa8.81□□□□□ -1
CHD2-210ENST00000627200 TGFBR3LH3BV60 316 aa8.81□□□□□ -1
CHD2-210ENST00000627200 NDC80O14777 642 aa8.81□□□□□ -1
CHD2-210ENST00000627200 PRMT3O60678 531 aa8.81□□□□□ -1
CHD2-210ENST00000627200 SNRPB2P08579 225 aaKnown RBP8.81□□□□□ -1
CHD2-210ENST00000627200 IL10P22301 178 aa8.81□□□□□ -1
CHD2-210ENST00000627200 JAK1P23458 1154 aa8.81□□□□□ -1
CHD2-210ENST00000627200 TNFRSF8P28908 595 aa8.81□□□□□ -1
CHD2-210ENST00000627200 EEF1DP29692 281 aaKnown RBP8.81□□□□□ -1
CHD2-210ENST00000627200 HNRNPH1P31943 449 aaKnown RBP8.81□□□□□ -1
CHD2-210ENST00000627200 HNRNPFP52597 415 aaKnown RBP8.81□□□□□ -1
CHD2-210ENST00000627200 ADORA2A-AS1P86434 159 aa8.81□□□□□ -1
CHD2-210ENST00000627200 FRG1Q14331 258 aaKnown RBP8.81□□□□□ -1
CHD2-210ENST00000627200 SLBPQ14493 270 aaKnown RBP eCLIP8.81□□□□□ -1
CHD2-210ENST00000627200 RNFT1Q5M7Z0 435 aa8.81□□□□□ -1
CHD2-210ENST00000627200 SP5Q6BEB4 398 aaPredicted RBP8.81□□□□□ -1
CHD2-210ENST00000627200 QSOX2Q6ZRP7 698 aa8.81□□□□□ -1
CHD2-210ENST00000627200 SYDE1Q6ZW31 735 aaPredicted RBP8.81□□□□□ -1
CHD2-210ENST00000627200 FRA10AC1Q70Z53 315 aa8.81□□□□□ -1
CHD2-210ENST00000627200 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.81□□□□□ -1
CHD2-210ENST00000627200 MRGPRGQ86SM5 289 aa8.81□□□□□ -1
CHD2-210ENST00000627200 ZBED8Q8IZ13 594 aa8.81□□□□□ -1
CHD2-210ENST00000627200 CA13Q8N1Q1 262 aa8.81□□□□□ -1
CHD2-210ENST00000627200 TBC1D19Q8N5T2 526 aa8.81□□□□□ -1
CHD2-210ENST00000627200 TMEM52Q8NDY8 209 aa8.81□□□□□ -1
CHD2-210ENST00000627200 DNAJB8Q8NHS0 232 aa8.81□□□□□ -1
CHD2-210ENST00000627200 ELP5Q8TE02 316 aa8.81□□□□□ -1
CHD2-210ENST00000627200 THAP3Q8WTV1 239 aaPredicted RBP8.81□□□□□ -1
CHD2-210ENST00000627200 SREK1Q8WXA9 508 aaKnown RBP8.81□□□□□ -1
CHD2-210ENST00000627200 ESAMQ96AP7 390 aa8.81□□□□□ -1
CHD2-210ENST00000627200 LRRC39Q96DD0 335 aa8.81□□□□□ -1
CHD2-210ENST00000627200 VPS39Q96JC1 886 aa8.81□□□□□ -1
CHD2-210ENST00000627200 GPR137Q96N19 417 aa8.81□□□□□ -1
CHD2-210ENST00000627200 KRT12Q99456 494 aa8.81□□□□□ -1
CHD2-210ENST00000627200 AIF1LQ9BQI0 150 aa8.81□□□□□ -1
CHD2-210ENST00000627200 TMEM79Q9BSE2 394 aa8.81□□□□□ -1
CHD2-210ENST00000627200 MOCS1Q9NZB8 636 aa8.81□□□□□ -1
CHD2-210ENST00000627200 LRFN1Q9P244 771 aa8.81□□□□□ -1
CHD2-210ENST00000627200 PYCARDQ9ULZ3 195 aa8.81□□□□□ -1
CHD2-210ENST00000627200 NPIPA1Q9UND3 350 aa8.81□□□□□ -1
CHD2-210ENST00000627200 OARD1Q9Y530 152 aa8.81□□□□□ -1
CHD2-210ENST00000627200 TCRBV16S1A1N1A0A5B0 115 aa8.8□□□□□ -1
CHD2-210ENST00000627200 ASPDHA6ND91 283 aa8.8□□□□□ -1
CHD2-210ENST00000627200 E7ESA3 106 aa8.8□□□□□ -1
CHD2-210ENST00000627200 PHGDHO43175 533 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 HNRNPRO43390 633 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 PRAMEF4O60810 478 aa8.8□□□□□ -1
CHD2-210ENST00000627200 SLC25A12O75746 678 aa8.8□□□□□ -1
CHD2-210ENST00000627200 MYO1DO94832 1006 aa8.8□□□□□ -1
CHD2-210ENST00000627200 WISP3O95389 354 aaPredicted RBP8.8□□□□□ -1
CHD2-210ENST00000627200 TBX6O95947 436 aaPredicted RBP8.8□□□□□ -1
CHD2-210ENST00000627200 SP1P08047 785 aa8.8□□□□□ -1
CHD2-210ENST00000627200 SMIM10L1P0DMW3 83 aa8.8□□□□□ -1
CHD2-210ENST00000627200 RNH1P13489 461 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 CD46P15529 392 aa8.8□□□□□ -1
CHD2-210ENST00000627200 SSTR1P30872 391 aa8.8□□□□□ -1
CHD2-210ENST00000627200 RFC3P40938 356 aa8.8□□□□□ -1
CHD2-210ENST00000627200 SLC6A12P48065 614 aa8.8□□□□□ -1
CHD2-210ENST00000627200 MLF1P58340 268 aa8.8□□□□□ -1
CHD2-210ENST00000627200 TAS2R50P59544 299 aa8.8□□□□□ -1
CHD2-210ENST00000627200 BTN3A2P78410 334 aa8.8□□□□□ -1
CHD2-210ENST00000627200 CDKL1Q00532 357 aa8.8□□□□□ -1
CHD2-210ENST00000627200 ALDH6A1Q02252 535 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 RUNX2Q13950 521 aa8.8□□□□□ -1
CHD2-210ENST00000627200 OR4D1Q15615 310 aa8.8□□□□□ -1
CHD2-210ENST00000627200 MAPKAPK3Q16644 382 aa8.8□□□□□ -1
CHD2-210ENST00000627200 PRAMEF9Q5VWM5 478 aa8.8□□□□□ -1
CHD2-210ENST00000627200 C3P1Q6ZMU1 363 aa8.8□□□□□ -1
CHD2-210ENST00000627200 C16orf47Q6ZP98 133 aaPredicted RBP8.8□□□□□ -1
CHD2-210ENST00000627200 SLCO4C1Q6ZQN7 724 aa8.8□□□□□ -1
CHD2-210ENST00000627200 VN1R5Q7Z5H4 357 aa8.8□□□□□ -1
CHD2-210ENST00000627200 RPS19BP1Q86WX3 136 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 SIAH3Q8IW03 269 aa8.8□□□□□ -1
CHD2-210ENST00000627200 CHERPQ8IWX8 916 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 NKAPQ8N5F7 415 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 CPSF7Q8N684 471 aaKnown RBP8.8□□□□□ -1
CHD2-210ENST00000627200 FAM47BQ8NA70 645 aa8.8□□□□□ -1
CHD2-210ENST00000627200 NFAM1Q8NET5 270 aaPredicted RBP8.8□□□□□ -1
CHD2-210ENST00000627200 CCT6BQ92526 530 aa8.8□□□□□ -1
CHD2-210ENST00000627200 EXT2Q93063 718 aa8.8□□□□□ -1
CHD2-210ENST00000627200 RHBDF1Q96CC6 855 aa8.8□□□□□ -1
CHD2-210ENST00000627200 SMIM10Q96HG1 83 aa8.8□□□□□ -1
CHD2-210ENST00000627200 MAGED4Q96JG8 741 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms