RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TEAD4Q15561 434 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 MLF2Q15773 248 aaPredicted RBP18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 ANKRD34AQ69YU3 496 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 ARL10Q8N8L6 244 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 LINC01555Q8NAE3 123 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 C11orf65Q8NCR3 313 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 ZNF555Q8NEP9 628 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 TMIGD2Q96BF3 282 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 HSH2DQ96JZ2 352 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 RIPOR3Q96MK2 946 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 FERD3LQ96RJ6 166 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 SLC35A5Q9BS91 424 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 SORBS1Q9BX66 1292 aaKnown RBP18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 MS4A8Q9BY19 250 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 ASPSCR1Q9BZE9 553 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 BTBD1Q9H0C5 482 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 OSGEPL1Q9H4B0 414 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 HS6ST1O60243 411 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 RNGTTO60942 597 aaKnown RBP18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 DNTTP04053 509 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 VLDLRP98155 873 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 CTBSQ01459 385 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 LSAMPQ13449 338 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 RFX4Q33E94 735 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 SDE2Q6IQ49 451 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 B3GNT6Q6ZMB0 384 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 ZNF852Q6ZMS4 543 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 MTSS1LQ765P7 747 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 THAP5Q7Z6K1 395 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 C8orf59Q8N0T1 100 aaPredicted RBP18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 OR52N2Q8NGI0 321 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 MAL2Q969L2 176 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 C1QTNF7Q9BXJ2 289 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 ZNF717Q9BY31 904 aaPredicted RBP18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 GABARAPL1Q9H0R8 117 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 FBRSQ9HAH7 460 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 VCX3AQ9NNX9 186 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 TAS2R9Q9NYW1 312 aa18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 TMEFF2Q9UIK5 374 aaPredicted RBP18.86■□□□□ 0.61
PCDHB11-202ENST00000624887 PRR19A6NJB7 356 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 H7BY64 318 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 KCNJ13O60928 360 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 TNFRSF21O75509 655 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 FKBP9O95302 570 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 IGFALSP35858 605 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 CRYBA2P53672 197 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 ADPRHP54922 357 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 KCNAB2Q13303 367 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 PRSS53Q2L4Q9 553 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 ZC3H12BQ5HYM0 836 aaKnown RBP18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 PIWIL3Q7Z3Z3 882 aaKnown RBP18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 DCP2Q8IU60 420 aaKnown RBP18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 ALDH16A1Q8IZ83 802 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 PRAP1Q96NZ9 151 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 BAG5Q9UL15 447 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 KCNK6Q9Y257 313 aa18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 WBP11Q9Y2W2 641 aaKnown RBP18.85■□□□□ 0.61
PCDHB11-202ENST00000624887 LATO43561 262 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 PIGAP37287 484 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 CRATP43155 626 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 HLCSP50747 726 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 RAD23AP54725 363 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 CYP4F2P78329 520 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 COX20Q5RI15 118 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 TMEM26Q6ZUK4 368 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 HORMAD1Q86X24 394 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 IL17RCQ8NAC3 791 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 CAMK1GQ96NX5 476 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 F2RL3Q96RI0 385 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 SLC6A16Q9GZN6 736 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ING2Q9H160 280 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 SLC6A17Q9H1V8 727 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 MIEF1Q9NQG6 463 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ADPRHL2Q9NX46 363 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 RAPGEFL1Q9UHV5 662 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ICKQ9UPZ9 632 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 A0A1W2PQF6 199 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 A0A1W2PRB8 838 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 FEZF1A0PJY2 475 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 hCG_2039718K7EN88 272 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ADAM23O75077 832 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ETFAP13804 333 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ELK4P28324 431 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 DNAJA1P31689 397 aaKnown RBP18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 BSGP35613 385 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 RAB28P51157 221 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ARHGDIAP52565 204 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 FADDQ13158 208 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ANGPTL8Q6UXH0 198 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 PAGE2Q7Z2X7 111 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 APOOQ9BUR5 198 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 DDX18Q9NVP1 670 aaKnown RBP18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 CLDND1Q9NY35 253 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 TAAR2Q9P1P5 351 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 ORC6Q9Y5N6 252 aa18.84■□□□□ 0.61
PCDHB11-202ENST00000624887 SUV39H1O43463 412 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 DPM1O60762 260 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 GCM2O75603 506 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms