RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PDXPQ96GD0 296 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 KCNC2Q96PR1 638 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 MYOCQ99972 504 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ANKRD60Q9BZ19 345 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 TAS2R7Q9NYW3 318 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 TBC1D29Q9UFV1 150 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 BAG5Q9UL15 447 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 CEP290O15078 2479 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 A0A1W2PRB8 838 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 OR52A4PA6NMU1 304 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 FAM58BPP0C7Q3 252 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 CD6P30203 668 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 BSGP35613 385 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 ARHGDIAP52565 204 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 RGNQ15493 299 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 ADPRMQ3LIE5 342 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 OR4C11Q6IEV9 310 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 Q6ZSR6 202 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 ZDHHC13Q8IUH4 622 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 TRIM48Q8IWZ4 208 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 CBR4Q8N4T8 237 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 C2orf73Q8N5S3 287 aaPredicted RBP15.62■□□□□ 0.09
LDB3-208ENST00000623007 FAM47BQ8NA70 645 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 MFSD9Q8NBP5 474 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 TSTD1Q8NFU3 115 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 WDR48Q8TAF3 677 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 OR5P2Q8WZ92 322 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 HLA-CQ95604 372 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 ZBED6CLQ96FA7 236 aaPredicted RBP15.62■□□□□ 0.09
LDB3-208ENST00000623007 FAM192AQ9GZU8 254 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 SRMSQ9H3Y6 488 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 TMEM38AQ9H6F2 299 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 SLC6A13Q9NSD5 602 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 ACSS1Q9NUB1 689 aaPredicted RBP15.62■□□□□ 0.09
LDB3-208ENST00000623007 ADPRHL2Q9NX46 363 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 PADI4Q9UM07 663 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 OAZ3Q9UMX2 235 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 NDRG2Q9UN36 371 aaKnown RBP15.62■□□□□ 0.09
LDB3-208ENST00000623007 ZNF451Q9Y4E5 1061 aa15.62■□□□□ 0.09
LDB3-208ENST00000623007 LRIT2A6NDA9 550 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 URADA6NGE7 173 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 A6NHS1 94 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 SHISA7A6NL88 538 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 H0YAE9 185 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 TPST1O60507 370 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 DPM1O60762 260 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 SMNDC1O75940 238 aaKnown RBP eCLIP15.61■□□□□ 0.09
LDB3-208ENST00000623007 SERPINA1P01009 418 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 IL3P08700 152 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 CHRM5P08912 532 aaPredicted RBP15.61■□□□□ 0.09
LDB3-208ENST00000623007 ZNF23P17027 643 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 UQCRC2P22695 453 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 KDELR2P33947 212 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 PCGF2P35227 344 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 ZIC1Q15915 447 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 NRF1Q16656 503 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 RFX4Q33E94 735 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 LEXMQ3ZCV2 418 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 ZNF425Q6IV72 752 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 UGT2A3Q6UWM9 527 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 ZZZ3Q8IYH5 903 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 CLECL1Q8IZS7 167 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 ZFP28Q8NHY6 868 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 GPBAR1Q8TDU6 330 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 NLNQ9BYT8 704 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 TWSG1Q9GZX9 223 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 SMPD3Q9NY59 655 aaPredicted RBP15.61■□□□□ 0.09
LDB3-208ENST00000623007 WSB2Q9NYS7 404 aaPredicted RBP15.61■□□□□ 0.09
LDB3-208ENST00000623007 NDUFA13Q9P0J0 144 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 DLGAP2Q9P1A6 1054 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 KLF15Q9UIH9 416 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 FAF1Q9UNN5 650 aaPredicted RBP15.61■□□□□ 0.09
LDB3-208ENST00000623007 BTBD3Q9Y2F9 522 aa15.61■□□□□ 0.09
LDB3-208ENST00000623007 A6NCN8 305 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 ISM1B1AKI9 464 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 GNGT2O14610 69 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 ASGR2P07307 311 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 PSMB5P28074 263 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 MAGEA2P43356 314 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SLC9A5Q14940 896 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SKIV2LQ15477 1246 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 ZNF630Q2M218 657 aaPredicted RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 ALG11Q2TAA5 492 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 NHSL2Q5HYW2 709 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 KRT80Q6KB66 452 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 EIF3MQ7L2H7 374 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 HIPK1Q86Z02 1210 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 OR2L5Q8NG80 312 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 FBXO30Q8TB52 745 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 CREB3L4Q8TEY5 395 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 AURKBQ96GD4 344 aaPredicted RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 TOE1Q96GM8 510 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 VPS50Q96JG6 964 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 F2RL3Q96RI0 385 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SLC35A5Q9BS91 424 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 ZNF717Q9BY31 904 aaPredicted RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 PRDM9Q9NQV7 894 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 GPR27Q9NS67 375 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 PNPLA3Q9NST1 481 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 IFT80Q9P2H3 777 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms