RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZSCAN5DPP0CG00 497 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 BMP8BP34820 402 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 YBEYP58557 167 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PLGLB1Q02325 96 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CARD16Q5EG05 197 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 MTFR2Q6P444 385 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 TMEM205Q6UW68 189 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 FAM183BPQ6ZVS7 135 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 BMP8AQ7Z5Y6 402 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SLC22A15Q8IZD6 547 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CLIP4Q8N3C7 705 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 LNX2Q8N448 690 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CCDC71LQ8N9Z2 235 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 IRGQQ8WZA9 623 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CNOT9Q92600 299 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RBM18Q96H35 190 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ADAD1Q96M93 576 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CD180Q99467 661 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 AMBRA1Q9C0C7 1298 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 WDR55Q9H6Y2 383 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 GLTPQ9NZD2 209 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OAZ3Q9UMX2 235 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PXDNQ92626 1479 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PEX10O60683 326 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 AQP1P29972 269 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 CASRP41180 1078 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DGKGP49619 791 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 RARRES1P49788 294 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SCNN1GP51170 649 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 HADHBP55084 474 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 HERVK_113P63132 956 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TMEM41BQ5BJD5 291 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 LRRC66Q68CR7 880 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PAPD4Q6PIY7 484 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SH3RF1Q7Z6J0 888 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PHTF2Q8N3S3 785 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 RNF128Q8TEB7 428 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 BORCS8Q96FH0 119 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PYURFQ96I23 114 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF514Q96K75 400 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 OR4K3Q96R72 315 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ARPC5LQ9BPX5 153 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ERVK-6Q9BXR3 956 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MKRN2Q9H000 416 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TMEM14AQ9Y6G1 99 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 GLYATL1P3A0A0U1RQE8 302 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 LCHNA4D1U4 455 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 BHMG1C9JSJ3 638 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 H3BSA7 217 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SLC25A14O95258 325 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PRKCGP05129 697 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MMP3P08254 477 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 JMJD7P0C870 316 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PRKCAP17252 672 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DGKEP52429 567 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 WNT3AP56704 352 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DNASE1L3Q13609 305 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 CREB3L2Q70SY1 520 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ANKS1BQ7Z6G8 1248 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MARVELD2Q8N4S9 558 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF781Q8N8C0 355 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 BADQ92934 168 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 NKX2-4Q9H2Z4 354 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PRMT8Q9NR22 394 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 KIAA1522Q9P206 1035 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MYO10Q9HD67 2058 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 H0YGN5 161 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 hCG_2039718K7EN88 272 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 GABRDO14764 452 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 VILLO15195 856 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DIRAS3O95661 229 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TPT1P13693 172 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 IFNGR1P15260 489 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PROZP22891 400 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SLC6A6P31641 620 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 NDUFAF5Q5TEU4 345 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 POGLUT1Q8NBL1 392 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DEDD2Q8WXF8 326 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PMEPA1Q969W9 287 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ULBP1Q9BZM6 244 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DPEP2Q9H4A9 486 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 POLMQ9NP87 494 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 KCNJ16Q9NPI9 418 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SDHAF3Q9NRP4 125 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 GPRC5BQ9NZH0 403 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 B3GNT3Q9Y2A9 372 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 A0A1W2PPM1 405 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SLC7A4O43246 635 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SGCEO43556 437 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 B3GALT2O43825 422 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 BCAS1O75363 584 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FARS2O95363 451 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 NT5EP21589 574 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 BDNFP23560 247 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SERPINF1P36955 418 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TAS2R20P59543 309 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 CTBP1Q13363 440 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms