RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FAM47EQ6ZV65 393 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
NEK3-210ENST00000620675 DSELQ8IZU8 1212 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 TWIST2Q8WVJ9 160 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 NAF1Q96HR8 494 aaKnown RBP12.94□□□□□ -0.34
NEK3-210ENST00000620675 SLC7A5P2Q9GIP4 190 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 EML4Q9HC35 981 aaKnown RBP12.94□□□□□ -0.34
NEK3-210ENST00000620675 THAP1Q9NVV9 213 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 SLC12A4Q9UP95 1085 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 NAALAD2Q9Y3Q0 740 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 TSC22D4Q9Y3Q8 395 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 NBEAQ8NFP9 2946 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 FOXE1O00358 373 aaPredicted RBP12.93□□□□□ -0.34
NEK3-210ENST00000620675 DSCR3O14972 297 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 PIP5K1BO14986 540 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CNOT3O75175 753 aaKnown RBP12.93□□□□□ -0.34
NEK3-210ENST00000620675 KLHL18O94889 574 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 KRT6AP02538 564 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 KRT6BP04259 564 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CAPNS1P04632 268 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 ALOX12P18054 663 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 KRT6CP48668 564 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 PDCD2Q16342 344 aaPredicted RBP12.93□□□□□ -0.34
NEK3-210ENST00000620675 MUM1Q2TAK8 710 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 TBC1D25Q3MII6 688 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 ABHD17CQ6PCB6 329 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 COX15Q7KZN9 410 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 LRRC8CQ8TDW0 803 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 REPS1Q96D71 796 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 MMABQ96EY8 250 aaPredicted RBP12.93□□□□□ -0.34
NEK3-210ENST00000620675 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CHST8Q9H2A9 424 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 PRDM7Q9NQW5 492 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 HAO1Q9UJM8 370 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 STK38LQ9Y2H1 464 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 RAP2CQ9Y3L5 183 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CCL27Q9Y4X3 112 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 USP24Q9UPU5 2620 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 A0A1B0GX78 115 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 ATP6AP2A0A1C7CYW4 349 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 OR2W5A6NFC9 320 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 KLF11O14901 512 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 EEDO75530 441 aaKnown RBP12.93□□□□□ -0.34
NEK3-210ENST00000620675 ATP6AP2O75787 350 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 F8A1P23610 371 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CERS1P27544 350 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 BTN3A2P78410 334 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 BTKQ06187 659 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 FAM214AQ32MH5 1076 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 ATG16L1Q676U5 607 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 Q6ZSR9 355 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 DTX1Q86Y01 620 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CLYBLQ8N0X4 340 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 OR2L5Q8NG80 312 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 GAL3ST3Q96A11 431 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CMTM7Q96FZ5 175 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 MAGEB18Q96M61 343 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 QRFPRQ96P65 431 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 NLNQ9BYT8 704 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 ILKAPQ9H0C8 392 aaPredicted RBP12.93□□□□□ -0.34
NEK3-210ENST00000620675 THSD1Q9NS62 852 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 FAM53CQ9NYF3 392 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 HCN3Q9P1Z3 774 aa12.93□□□□□ -0.34
NEK3-210ENST00000620675 CACNA1GO43497 2377 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 GALR3O60755 368 aaPredicted RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 JRKO75564 520 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 RPL14P50914 215 aaKnown RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 EFNA3P52797 238 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 ARSFP54793 590 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 TBL3Q12788 808 aaKnown RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 FAM53BQ14153 422 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 NKAIN1Q4KMZ8 207 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 VWA5B1Q5TIE3 1220 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 GARNL3Q5VVW2 1013 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 CYB5D1Q6P9G0 228 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 FAM198BQ6UWH4 519 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 C6orf15Q6UXA7 325 aaPredicted RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 ZNF517Q6ZMY9 492 aaPredicted RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 ERMP1Q7Z2K6 904 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 MAVSQ7Z434 540 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 RAB3IL1Q8TBN0 382 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 MR1Q95460 341 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 APIPQ96GX9 242 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 CTSFQ9UBX1 484 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 SRPK3Q9UPE1 567 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 SLC22A7Q9Y694 548 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 LOC101059948A0A1B0GTJ6 334 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 TCP11X1B4DZS4 312 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 STMND1H3BQB6 276 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 TXNDC9O14530 226 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 RAD1O60671 282 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 PTX3P26022 381 aaPredicted RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 GSTM2P28161 218 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 BSGP35613 385 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms