RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 A0A087X1B8 175 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 LOC105369274A0A096LPK9 316 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 LOC102723532A0A0G2JNH3 316 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 OR2A25A4D2G3 310 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NCF1BA6NI72 391 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NCF1CA8MVU1 366 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CASQ2O14958 399 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 HDAC3O15379 428 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 EFSO43281 561 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 DENRO43583 198 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 KLK8O60259 260 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NPHS1O60500 1241 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RAD1O60671 282 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 KERAO60938 352 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SMIM24O75264 130 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ENTPD5O75356 428 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ONECUT2O95948 504 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ALBP02768 609 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 STATHP02808 62 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ENO2P09104 434 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 LTA4HP09960 611 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NCF1P14598 390 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ANPEPP15144 967 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 HOXB6P17509 224 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CYP2A7P20853 494 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 AGXTP21549 392 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CDH3P22223 829 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RPL14P50914 215 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SLC12A2P55011 1212 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ITGA1P56199 1179 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 AP1S2P56377 157 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 DNAJB13P59910 316 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ATP6V0D1P61421 351 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CXADRP78310 365 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CDKL1Q00532 357 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PRDX1Q06830 199 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 C19orf57Q0VDD7 668 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 STX5Q13190 355 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TUBB3Q13509 450 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TSTA3Q13630 321 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RBBP5Q15291 538 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TGFBIQ15582 683 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SF1Q15637 639 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 FAM214AQ32MH5 1076 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PTCHD3Q3KNS1 767 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 GARNL3Q5VVW2 1013 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PRAMEF13Q5VWM6 474 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 FRMPD2BQ6IN97 320 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 FBXO42Q6P3S6 717 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM154Q6P9G4 183 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 BORAQ6PGQ7 559 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 EPGNQ6UW88 154 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RINLQ6ZS11 566 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ACAD11Q709F0 780 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RAPH1Q70E73 1250 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RPS27LQ71UM5 84 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TIPARPQ7Z3E1 657 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 VN1R4Q7Z5H5 301 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ADAMTSL2Q86TH1 951 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SYVN1Q86TM6 617 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PAQR7Q86WK9 346 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ZFAND4Q86XD8 727 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 GPSM1Q86YR5 675 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SYTL1Q8IYJ3 562 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ULK2Q8IYT8 1036 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ST13P4Q8IZP2 240 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 OR4N4Q8N0Y3 316 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 C19orf47Q8N9M1 422 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SLC38A9Q8NBW4 561 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PDPRQ8NCN5 879 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RBM15BQ8NDT2 890 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF740Q8NDX6 193 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 MCOLN3Q8TDD5 553 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 APOBEC4Q8WW27 367 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ATL1Q8WXF7 558 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 EXT2Q93063 718 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF501Q96CX3 271 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 MOCOSQ96EN8 888 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF285Q96NJ3 590 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 GBP5Q96PP8 586 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 OR6C1Q96RD1 312 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 DPH7Q9BTV6 452 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 THTPAQ9BU02 230 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TRMOQ9BU70 441 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NLNQ9BYT8 704 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 KLHL4Q9C0H6 718 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 AICDAQ9GZX7 198 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SPRTNQ9H040 489 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 DRC3Q9H069 523 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 GPN2Q9H9Y4 310 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CLK4Q9HAZ1 481 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NMRAL1Q9HBL8 299 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 EML4Q9HC35 981 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 S100A14Q9HCY8 104 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 LHX9Q9NQ69 397 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PFDN4Q9NQP4 134 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 OXSMQ9NWU1 459 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NMRK1Q9NWW6 199 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 ARL15Q9NXU5 204 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM216Q9P0N5 145 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms