RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CPT1CQ8TCG5 803 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 UTP15Q8TED0 518 aaKnown RBP15.1■□□□□ 0.01
BRCA1-228ENST00000618469 CREB3L4Q8TEY5 395 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 PTCD3Q96EY7 689 aaKnown RBP15.1■□□□□ 0.01
BRCA1-228ENST00000618469 PEX11GQ96HA9 241 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 EFCAB11Q9BUY7 163 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 VN1R1Q9GZP7 353 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 CPSF2Q9P2I0 782 aaKnown RBP15.1■□□□□ 0.01
BRCA1-228ENST00000618469 NSG1A0A0A6YYJ2 146 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 CCDC189A1A4V9 331 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 K7EPI3 171 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 DPM1O60762 260 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 SERPINA6P08185 405 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 MYBL2P10244 700 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 EPORP19235 508 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 CD22P20273 847 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 GSTM2P28161 218 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 CHIT1Q13231 466 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 SETDB1Q15047 1291 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 PFKFB4Q16877 469 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 NADK2Q4G0N4 442 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 ADNP2Q6IQ32 1131 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 NIPAL1Q6NVV3 410 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 PLD6Q8N2A8 252 aaKnown RBP15.09■□□□□ 0.01
BRCA1-228ENST00000618469 METTL21AQ8WXB1 218 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 GAL3ST3Q96A11 431 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 GPR78Q96P69 363 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 MFRPQ9BY79 579 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 PITHD1Q9GZP4 211 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-228ENST00000618469 AICDAQ9GZX7 198 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 KLHL31Q9H511 634 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 ZNF552Q9H707 407 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-228ENST00000618469 PRM3Q9NNZ6 103 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 RIC8BQ9NVN3 520 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 ZNF358Q9NW07 568 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 LUZP4Q9P127 313 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 COPG2Q9UBF2 871 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 XPR1Q9UBH6 696 aa15.09■□□□□ 0.01
BRCA1-228ENST00000618469 CRYBG3Q68DQ2 2970 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 IGHV1-45A0A0A0MS14 117 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 A0A0G2JN53 185 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 ANKDD1BA6NHY2 528 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 PCDH17O14917 1159 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 ERI3O43414 337 aaKnown RBP15.08■□□□□ 0
BRCA1-228ENST00000618469 KLHL41O60662 606 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 HNRNPH1P31943 449 aaKnown RBP15.08■□□□□ 0
BRCA1-228ENST00000618469 SOX8P57073 446 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 STXBP1P61764 594 aaKnown RBP15.08■□□□□ 0
BRCA1-228ENST00000618469 Q0VFX4 171 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 TSNAXIP1Q2TAA8 658 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 EIF2S3LQ2VIR3 472 aaKnown RBP15.08■□□□□ 0
BRCA1-228ENST00000618469 PRR30Q53SZ7 412 aaPredicted RBP15.08■□□□□ 0
BRCA1-228ENST00000618469 PAGE2BQ5JRK9 111 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 LANCL3Q6ZV70 420 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 NDUFAF7Q7L592 441 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 HPS6Q86YV9 775 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 WDR34Q96EX3 536 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 THOC3Q96J01 351 aaKnown RBP15.08■□□□□ 0
BRCA1-228ENST00000618469 SCYL1Q96KG9 808 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 OR1F2PQ96R84 312 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 TXLNGYQ9BZA5 131 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 LHPPQ9H008 270 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 NT5DC2Q9H857 520 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 C5AR2Q9P296 337 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 ANGPTL3Q9Y5C1 460 aa15.08■□□□□ 0
BRCA1-228ENST00000618469 CENPEQ02224 2701 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 LOC102723996A0A087X1L8 192 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 A0A1W2PQ72 361 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 OR2W5A6NFC9 320 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 LRRC14BA6NHZ5 514 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 CHST10O43529 356 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 CLEC3AO75596 197 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 FHP07954 510 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 CYC1P08574 325 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 SNRPAP09012 282 aaKnown RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 EPB42P16452 691 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 GCAP28676 217 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 ALDH18A1P54886 795 aaKnown RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 MRPL49Q13405 166 aaKnown RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 LAPTM5Q13571 262 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 NAA30Q147X3 362 aaPredicted RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 PCOLCEQ15113 449 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 TBCCQ15814 346 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 TMEM205Q6UW68 189 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 VN1R5Q7Z5H4 357 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 MYLK4Q86YV6 388 aaPredicted RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 SRRM1Q8IYB3 904 aaKnown RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 TEX9Q8N6V9 391 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 TM9SF4Q92544 642 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 TBC1D20Q96BZ9 403 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 SEC16BQ96JE7 1060 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 EPB41L4BQ9H329 900 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 C19orf25Q9UFG5 118 aaPredicted RBP15.07■□□□□ 0
BRCA1-228ENST00000618469 DOCK10Q96BY6 2186 aa15.07■□□□□ 0
BRCA1-228ENST00000618469 IGHV3-20A0A0C4DH32 117 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 KLK8O60259 260 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 DNAJB6O75190 326 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 SEC24DO94855 1032 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 UQCRHP07919 91 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 CELA2AP08217 269 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms