RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LINGO3P0C6S8 592 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 FAM58BPP0C7Q3 252 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 HOXB3P14651 431 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 CASP9P55211 416 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 LRRC74AQ0VAA2 488 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 RGNQ15493 299 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 OTUD3Q5T2D3 398 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 IYDQ6PHW0 289 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ABRAXAS1Q6UWZ7 409 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ST13P4Q8IZP2 240 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 GOT1L1Q8NHS2 421 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 MAGEE2Q8TD90 523 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 TFAP2CQ92754 450 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 MTERF3Q96E29 417 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 PYURFQ96I23 114 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 CHST8Q9H2A9 424 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 KIR3DX1Q9H7L2 352 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 UBE2ZQ9H832 354 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 TAAR2Q9P1P5 351 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 USP36Q9P275 1121 aaKnown RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 MAGED1Q9Y5V3 778 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 COLEC10Q9Y6Z7 277 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 A0A0G2JN53 185 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 CAPN5O15484 640 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZNF682O95780 498 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 PPIBP23284 216 aaKnown RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 BCL6P41182 706 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 IST1P53990 364 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 SRP54P61011 504 aaKnown RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ALG11Q2TAA5 492 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ERICH5Q6P6B1 374 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ANGPTL8Q6UXH0 198 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 PAGE2Q7Z2X7 111 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 UBE3DQ7Z6J8 389 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 SYNPOQ8N3V7 929 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 TMEM145Q8NBT3 493 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 OR2L3Q8NG85 312 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 OR4E2Q8NGC2 313 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 CREB3L4Q8TEY5 395 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 TM4SF18Q96CE8 201 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC6A16Q9GZN6 736 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 CXorf56Q9H5V9 222 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 MAGIXQ9H6Y5 334 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZNF624Q9P2J8 865 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 DNAJB9Q9UBS3 223 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 ACSL6Q9UKU0 697 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 KLHL20Q9Y2M5 609 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 SNRNP200O75643 2136 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 TRBC2A0A5B9 178 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 EME2A4GXA9 379 aaPredicted RBP16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 HAT1O14929 419 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 PPM1DO15297 605 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 NELFEP18615 380 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 Q6ZSR6 202 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 NAGSQ8N159 534 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 LCN9Q8WX39 176 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 MAL2Q969L2 176 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 RGMAQ96B86 450 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 MACROD1Q9BQ69 325 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC35A5Q9BS91 424 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 DPH7Q9BTV6 452 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 ADI1Q9BV57 179 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 ANKRD60Q9BZ19 345 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 AICDAQ9GZX7 198 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 ABCG4Q9H172 646 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 C8orf4Q9NR00 106 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 C2orf42Q9NWW7 574 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 CYP8B1Q9UNU6 501 aa16.55■□□□□ 0.24
PCDHGC3-205ENST00000617641 GNAO1P09471 354 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 SMIM18P0DKX4 95 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 KDELR2P33947 212 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 PLA2G16P53816 162 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 VAC14Q08AM6 782 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 LRRC32Q14392 662 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 SKIV2LQ15477 1246 aaKnown RBP16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 COX20Q5RI15 118 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 AMER3Q8N944 861 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 OR5AK3PQ8NH89 298 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 TMEM121BQ9BXQ6 578 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 GPATCH2Q9NW75 528 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 RAPGEFL1Q9UHV5 662 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 CORO2BQ9UQ03 480 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 GMEB1Q9Y692 573 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 A0A1W2PRB8 838 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 ISM1B1AKI9 464 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 TNFRSF10CO14798 259 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 TMPRSS11DO60235 418 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 CLEC3AO75596 197 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 IGHV4-34P06331 123 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 SRFP11831 508 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 IL1RNP18510 177 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 DDCP20711 480 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 ALDH9A1P49189 494 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 MVDP53602 400 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 MERTKQ12866 999 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms