RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 IGHEP01854 428 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 EEF1A2Q05639 463 aaKnown RBP15.8■□□□□ 0.12
CBWD3-211ENST00000615061 PAGE2BQ5JRK9 111 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 WDR93Q6P2C0 686 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 GALNT16Q8N428 558 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 PITHD1Q9GZP4 211 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-211ENST00000615061 RHBGQ9H310 441 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 IPPKQ9H8X2 491 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 MLXIPLQ9NP71 852 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 URADA6NGE7 173 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 ERI3O43414 337 aaKnown RBP15.79■□□□□ 0.12
CBWD3-211ENST00000615061 SMIM24O75264 130 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 PCNAP12004 261 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 ACPPP15309 386 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 PLA2G16P53816 162 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 STXBP1P61764 594 aaKnown RBP15.79■□□□□ 0.12
CBWD3-211ENST00000615061 BTN3A2P78410 334 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 PCDH1Q08174 1060 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 Q0VFX4 171 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 LAPTM5Q13571 262 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 TUBB8Q3ZCM7 444 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 FAM219BQ5XKK7 198 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 LANCL3Q6ZV70 420 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 PARP9Q8IXQ6 854 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 OR7G3Q8NG95 312 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 OR52B6Q8NGF0 335 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 CDK15Q96Q40 435 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 F2RL3Q96RI0 385 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 REXO4Q9GZR2 422 aaKnown RBP15.79■□□□□ 0.12
CBWD3-211ENST00000615061 ZNF160Q9HCG1 818 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 ZBTB26Q9HCK0 441 aa15.79■□□□□ 0.12
CBWD3-211ENST00000615061 PCDHGA9Q9Y5G4 932 aaKnown RBP15.79■□□□□ 0.12
CBWD3-211ENST00000615061 TNPO3Q9Y5L0 923 aaKnown RBP15.79■□□□□ 0.12
CBWD3-211ENST00000615061 BAHCC1Q9P281 2608 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 A8MT66 165 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 B8ZZF3 427 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 COX6A1P12074 109 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 HIST2H2ACQ16777 129 aaPredicted RBP15.78■□□□□ 0.12
CBWD3-211ENST00000615061 ADPRMQ3LIE5 342 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 HIST2H2AA3Q6FI13 130 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 GRHL2Q6ISB3 625 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 MED27Q6P2C8 311 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 ASB18Q6ZVZ8 466 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 LAS2Q8IYD9 372 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 ZNF473Q8WTR7 871 aaKnown RBP15.78■□□□□ 0.12
CBWD3-211ENST00000615061 GAL3ST3Q96A11 431 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 PARD6BQ9BYG5 372 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 NOL11Q9H8H0 719 aaKnown RBP15.78■□□□□ 0.12
CBWD3-211ENST00000615061 ACTR8Q9H981 624 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 ATP13A2Q9NQ11 1180 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 LANCL2Q9NS86 450 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 GPR83Q9NYM4 423 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 PCTPQ9UKL6 214 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 RNF11Q9Y3C5 154 aa15.78■□□□□ 0.12
CBWD3-211ENST00000615061 IGHV3-20A0A0C4DH32 117 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 STX16-NPEPL1H3BU86 382 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 PPP6CO00743 305 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 OR7A17O14581 309 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 STX16O14662 325 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 TSPAN8P19075 237 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 ITGA3P26006 1051 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 GSTM2P28161 218 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 PIK3CGP48736 1102 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 DDX39BQ13838 428 aaKnown RBP15.77■□□□□ 0.12
CBWD3-211ENST00000615061 TMEM205Q6UW68 189 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 SH2D5Q6ZV89 423 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 TDRPQ86YL5 185 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 ACMSDQ8TDX5 336 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 PRM3Q9NNZ6 103 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 TENM4Q6N022 2769 aa15.77■□□□□ 0.12
CBWD3-211ENST00000615061 A0A1B0GTL3 188 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 FAM227AF5H4B4 570 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 B4GALT2O60909 372 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 TGFB1P01137 390 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 FHP07954 510 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 CELA2AP08217 269 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 RPS17P08708 135 aaKnown RBP15.77■□□□□ 0.11
CBWD3-211ENST00000615061 C8orf89P0DMQ9 161 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 KRT15P19012 456 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 PGDP52209 483 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 AIMP2Q13155 320 aaKnown RBP15.77■□□□□ 0.11
CBWD3-211ENST00000615061 RUNX2Q13950 521 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 CPSF6Q16630 551 aaKnown RBP eCLIP15.77■□□□□ 0.11
CBWD3-211ENST00000615061 ABHD17CQ6PCB6 329 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 OR2L5Q8NG80 312 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 TSLPQ969D9 159 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 TBC1D20Q96BZ9 403 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 SEC16BQ96JE7 1060 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 FAR2Q96K12 515 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 MTERF1Q99551 399 aaKnown RBP15.77■□□□□ 0.11
CBWD3-211ENST00000615061 MS4A8Q9BY19 250 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF552Q9H707 407 aaPredicted RBP15.77■□□□□ 0.11
CBWD3-211ENST00000615061 SEMA4BQ9NPR2 832 aaPredicted RBP15.77■□□□□ 0.11
CBWD3-211ENST00000615061 EMCNQ9ULC0 261 aa15.77■□□□□ 0.11
CBWD3-211ENST00000615061 IGHV1-45A0A0A0MS14 117 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 TLDC2A0PJX2 215 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 SAP18O00422 153 aaKnown RBP15.76■□□□□ 0.11
CBWD3-211ENST00000615061 RTCAO00442 366 aaKnown RBP15.76■□□□□ 0.11
CBWD3-211ENST00000615061 DLX3O60479 287 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 CERS1P27544 350 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms