RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ALAS2P22557 587 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 ETV5P41161 510 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 RAB8AP61006 207 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 BTN3A2P78410 334 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 ACSM2AQ08AH3 577 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 TBL3Q12788 808 aaKnown RBP13.97□□□□□ -0.17
CD48-203ENST00000613788 ACSM2BQ68CK6 577 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 OR4C11Q6IEV9 310 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 RHBDD2Q6NTF9 364 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 TTLL10Q6ZVT0 673 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 METTL4Q8N3J2 472 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 ARHGEF39Q8N4T4 335 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 OR2T11Q8NH01 316 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 CHTF18Q8WVB6 975 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 CLIP3Q96DZ5 547 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 C10orf90Q96M02 699 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 C17orf62Q9BQA9 187 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 MRPL1Q9BYD6 325 aaKnown RBP13.97□□□□□ -0.17
CD48-203ENST00000613788 AICDAQ9GZX7 198 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 EPN3Q9H201 632 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
CD48-203ENST00000613788 NDOR1Q9UHB4 597 aa13.97□□□□□ -0.17
CD48-203ENST00000613788 MDC1Q14676 2089 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 A0A1W2PNU3 283 aaPredicted RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 PLPP1O14494 284 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 SDHDO14521 159 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 DSCR3O14972 297 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 LSM1O15116 133 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 CPNE3O75131 537 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 PEX11AO75192 247 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 MYO1DO94832 1006 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 TNFSF15O95150 251 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 NSA2O95478 260 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 SSR2P43308 183 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 GCGRP47871 477 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 AVPR1BP47901 424 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 MTTPP55157 894 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 FOXC1Q12948 553 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 MAD2L1Q13257 205 aaPredicted RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 SMU1Q2TAY7 513 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 GALNTL6Q49A17 601 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 DEFB134Q4QY38 66 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 VWA5B1Q5TIE3 1220 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 PRAMEF17Q5VTA0 474 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 ACAD11Q709F0 780 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 DGLUCYQ7Z3D6 616 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 MAVSQ7Z434 540 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 UBE3DQ7Z6J8 389 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 NUDT13Q86X67 352 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 PARP9Q8IXQ6 854 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 C1orf52Q8N6N3 182 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 CEP70Q8NHQ1 597 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 ACTRT2Q8TDY3 377 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 STON2Q8WXE9 905 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 THOC1Q96FV9 657 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 APIPQ96GX9 242 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 MAELQ96JY0 434 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 NRSN2Q9GZP1 204 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 WDR55Q9H6Y2 383 aaPredicted RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 AKTIPQ9H8T0 292 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 CLK4Q9HAZ1 481 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 PRDM7Q9NQW5 492 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 SIRT5Q9NXA8 310 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 KLHL14Q9P2G3 628 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 ADAM29Q9UKF5 820 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 MRPS2Q9Y399 296 aaKnown RBP13.96□□□□□ -0.17
CD48-203ENST00000613788 TMED5Q9Y3A6 229 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 B3GALT1Q9Y5Z6 326 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 PIEZO1Q92508 2521 aa13.96□□□□□ -0.17
CD48-203ENST00000613788 CNOT1A5YKK6 2376 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 A0A0G2JND7 137 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 A0A1B0GX78 115 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ARHGAP10A1A4S6 786 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 H0YIG0 161 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 GALR3O60755 368 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 TIAF1O95411 115 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 NTRK1P04629 796 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 LBPP18428 481 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 DRD4P21917 467 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 EPHA3P29320 983 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 RBMS1P29558 406 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 BSGP35613 385 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 IDH3AP50213 366 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 GABREP78334 506 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 SLC9B1Q4ZJI4 515 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 C6orf136Q5SQH8 315 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 PRMT9Q6P2P2 845 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 LARP4Q71RC2 724 aaKnown RBP eCLIP13.95□□□□□ -0.18
CD48-203ENST00000613788 COMMD6Q7Z4G1 85 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ZFAND4Q86XD8 727 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 MARCH9Q86YJ5 346 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 RFWD2Q8NHY2 731 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 PROKR1Q8TCW9 393 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 SERINC2Q96SA4 455 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ULBP3Q9BZM4 244 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 FAM107BQ9H098 131 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 DDX31Q9H8H2 851 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms