RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	GLYR1	Q49A26	553 aa	Predicted RBP	13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	ACSM2B	Q68CK6	577 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	KIAA1841	Q6NSI8	718 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	XKRX	Q6PP77	449 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	CXCL17	Q6UXB2	119 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	TCTE3	Q8IZS6	198 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	NAGS	Q8N159	534 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	GDPD1	Q8N9F7	314 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	BTN2A2	Q8WVV5	523 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	GEMIN6	Q8WXD5	167 aa	Known RBP	13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	TTC9	Q92623	222 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	COQ8B	Q96D53	544 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	C11orf24	Q96F05	449 aa	Predicted RBP	13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	PIP5K1A	Q99755	562 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	RANGRF	Q9HD47	186 aa	Predicted RBP	13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	FZD3	Q9NPG1	666 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	NDUFB11	Q9NX14	153 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	AFF4	Q9UHB7	1163 aa	Known RBP	13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	CARD8	Q9Y2G2	431 aa		13.2	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC38A8	A6NNN8	435 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TFEC	O14948	347 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC16A5	O15375	505 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	PCDH7	O60245	1069 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	DUSP11	O75319	330 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TRIM3	O75382	744 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	LGI1	O95970	557 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	MYC	P01106	439 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	OPN1SW	P03999	348 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	MPC1L	P0DKB6	136 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	HSD3B1	P14060	373 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	AKR1A1	P14550	325 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TNFRSF1B	P20333	461 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	MYL9	P24844	172 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	HSD3B2	P26439	372 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	ERP29	P30040	261 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CORO1A	P31146	461 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	XCR1	P46094	333 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	PTPN5	P54829	565 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	ARPP19	P56211	112 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	FCHO2	Q0JRZ9	810 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CHIT1	Q13231	466 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	GPR17	Q13304	367 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	DOC2B	Q14184	412 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	MBTPS1	Q14703	1052 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	LARS2	Q15031	903 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CDKN3	Q16667	212 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TRIM60	Q495X7	471 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TIGD3	Q6B0B8	471 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SYCE2	Q6PIF2	218 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TPGS1	Q6ZTW0	290 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	C16orf59	Q7L2K0	433 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	FAM46D	Q8NEK8	389 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CDC26	Q8NHZ8	85 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	ZFAND1	Q8TCF1	268 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	ASB11	Q8WXH4	323 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	COPS8	Q99627	209 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	MMP28	Q9H239	520 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC25A19	Q9HC21	320 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	ZDHHC3	Q9NYG2	299 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	NOD1	Q9Y239	953 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC22A14	Q9Y267	594 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	FCF1	Q9Y324	198 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130		B4DXG7	233 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	RNASET2	O00584	256 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TNFRSF21	O75509	655 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CLDN7	O95471	211 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	VNN2	O95498	520 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	KLKB1	P03952	638 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	HLA-DMA	P28067	261 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CCR7	P32248	378 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CRYBB2	P43320	205 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CRISP1	P54107	249 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	AP1S2	P56377	157 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SNRPG	P62308	76 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC35F1	Q5T1Q4	408 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	GCNT6	Q5T4J0	391 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	ADGRF1	Q5T601	910 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	RNLS	Q5VYX0	342 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	FBXO22	Q8NEZ5	403 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	WDR20	Q8TBZ3	569 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	CXorf40B	Q96DE9	158 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	FRMD6	Q96NE9	622 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	MND1	Q9BWT6	205 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	RNF121	Q9H920	327 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SNTG1	Q9NSN8	517 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SH3BP4	Q9P0V3	963 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	NUFIP1	Q9UHK0	495 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	KLHL21	Q9UJP4	597 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	OGDHL	Q9ULD0	1010 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC6A14	Q9UN76	642 aa		13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	TMA7	Q9Y2S6	64 aa	Known RBP	13.19	□□□□□ -0.3
UBE2F-223	ENST00000612130	PRAMEF25	A6NGN4	478 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	GABRR3	A8MPY1	467 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130		H3BM21	787 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	ERVH48-1	M5A8F1	160 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	STC2	O76061	302 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms