RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, human

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-208	ENST00000612050	ATRX	P46100	2492 aa		11.65	□□□□□ -0.54
CBWD3-208	ENST00000612050	SCN3A	Q9NY46	2000 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	LOC102723996	A0A087X1L8	192 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	IQANK1	A0A1B0GTG1	560 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	MAGEB17	A8MXT2	336 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	TAPBP	O15533	448 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ERI3	O43414	337 aa	Known RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	CHST10	O43529	356 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	CDC123	O75794	336 aa	Predicted RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ABHD2	P08910	425 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	SNRPA	P09012	282 aa	Known RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	PCNA	P12004	261 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ALDH18A1	P54886	795 aa	Known RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	MLLT10	P55197	1068 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	BTN3A2	P78410	334 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ARG2	P78540	354 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ABRAXAS2	Q15018	415 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	TBCC	Q15814	346 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	BTBD16	Q32M84	506 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	C18orf21	Q32NC0	220 aa	Predicted RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ABHD17B	Q5VST6	288 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	SLC6A19	Q695T7	634 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	METTL2B	Q6P1Q9	378 aa	Known RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	MED27	Q6P2C8	311 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	TMEM205	Q6UW68	189 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	CHSY3	Q70JA7	882 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	AFAP1L2	Q8N4X5	818 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ANKRD53	Q8N9V6	530 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	DNAJB14	Q8TBM8	379 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ATP6V1E2	Q96A05	226 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	MOCOS	Q96EN8	888 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	CNDP1	Q96KN2	507 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	ATOH8	Q96SQ7	321 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	REXO4	Q9GZR2	422 aa	Known RBP	11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	AGPAT4	Q9NRZ5	378 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	IGSF5	Q9NSI5	407 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	PTGFRN	Q9P2B2	879 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050	MED13	Q9UHV7	2174 aa		11.64	□□□□□ -0.55
CBWD3-208	ENST00000612050		A0A1W2PQ72	361 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PRMT3	O60678	531 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PRR35	P0CG20	571 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	KCNC1	P48547	511 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	OR4D2	P58180	307 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	FOXK1	P85037	733 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	MFAP5	Q13361	173 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	DOC2A	Q14183	400 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	ELOA	Q14241	798 aa	Known RBP	11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	SETDB1	Q15047	1291 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	TLR1	Q15399	786 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PFKFB4	Q16877	469 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	FBXO48	Q5FWF7	155 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	LINC00696	Q6ZRV3	163 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PDSS2	Q86YH6	399 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	TEX9	Q8N6V9	391 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PLPP5	Q8NEB5	264 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	OR2L5	Q8NG80	312 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	UHMK1	Q8TAS1	419 aa	Known RBP	11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	UBTD2	Q8WUN7	234 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	ESAM	Q96AP7	390 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	WDR34	Q96EX3	536 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PTCHD1	Q96NR3	888 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	KCNC2	Q96PR1	638 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	SERINC2	Q96SA4	455 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	RBCK1	Q9BYM8	510 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	SPNS1	Q9H2V7	528 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	RHBG	Q9H310	441 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	ACTR8	Q9H981	624 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	COPG2	Q9UBF2	871 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	PCDHGA11	Q9Y5H2	935 aa		11.63	□□□□□ -0.55
CBWD3-208	ENST00000612050	B4GALT2	O60909	372 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	JRK	O75564	520 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	SEC24D	O94855	1032 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	ALDOA	P04075	364 aa	Known RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	TAC1	P20366	129 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	RAP1GDS1	P52306	607 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	PLA2G16	P53816	162 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	MTTP	P55157	894 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	OLR1	P78380	273 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	IRF9	Q00978	393 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	DLG1	Q12959	904 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	NAA30	Q147X3	362 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	INPP5J	Q15735	1006 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	TMEM35A	Q53FP2	167 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	COLEC12	Q5KU26	742 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	TEX35	Q5T0J7	233 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	LIPJ	Q5W064	366 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	PLAG1	Q6DJT9	500 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	QSOX2	Q6ZRP7	698 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	ANKRD37	Q7Z713	158 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	LCA5	Q86VQ0	697 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	CENPL	Q8N0S6	344 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	CYP4X1	Q8N118	509 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	EIF1AD	Q8N9N8	165 aa	Known RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	OR5T3	Q8NGG3	340 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	BRIX1	Q8TDN6	353 aa	Known RBP	11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	CREB3L4	Q8TEY5	395 aa		11.62	□□□□□ -0.55
CBWD3-208	ENST00000612050	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms