RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ARHGEF39Q8N4T4 335 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 TBC1D19Q8N5T2 526 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 MFSD9Q8NBP5 474 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 CAMKVQ8NCB2 501 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 CATSPER1Q8NEC5 780 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 OR4K1Q8NGD4 311 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 HAS2Q92819 552 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 MIEF2Q96C03 454 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 RHBDF1Q96CC6 855 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 UBXN10Q96LJ8 280 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 TRPC4Q9UBN4 977 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 SH3BGRL2Q9UJC5 107 aa18.15■□□□□ 0.5
SGMS1-208ENST00000608287 TRBC2A0A5B9 178 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 VSTM2BA6NLU5 285 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 FFAR3O14843 346 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 GPR42O15529 346 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 FOXS1O43638 330 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 ALOX12BO75342 701 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 ZGLP1P0C6A0 271 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 SLC35G6P0C7Q6 338 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 SLC35E2BP0CK96 405 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 GDF5P43026 501 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 AVPR1BP47901 424 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 DSG2Q14126 1118 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 FAM53BQ14153 422 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 TMPRSS11BQ86T26 416 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 KBTBD2Q8IY47 623 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 EID3Q8N140 333 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 OR11G2Q8NGC1 345 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 SLC13A3Q8WWT9 602 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 EXT2Q93063 718 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 TM4SF19Q96DZ7 209 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 MAGED4Q96JG8 741 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 TAAR6Q96RI8 345 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 CRB3Q9BUF7 120 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 ACSS3Q9H6R3 686 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 WWOXQ9NZC7 414 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 RNF112Q9ULX5 631 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 KCNE2Q9Y6J6 123 aa18.14■□□□□ 0.49
SGMS1-208ENST00000608287 A0A1B0GTL3 188 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 MAP2K7O14733 419 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 SLC19A2O60779 497 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 SERPIND1P05546 499 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 RHOXF2BP0C7M4 288 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 DRD2P14416 443 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 HOXB4P17483 251 aaPredicted RBP18.13■□□□□ 0.49
SGMS1-208ENST00000608287 SLC26A3P40879 764 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 ART1P52961 327 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 KRTAP10-9P60411 292 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 KLC1Q07866 573 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 NXPE4Q6UWF7 544 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 IFT20Q8IY31 132 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 TCAIMQ8N3R3 496 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 AMER3Q8N944 861 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 KCT2Q8NC54 265 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 ZNF740Q8NDX6 193 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 CHDHQ8NE62 594 aaPredicted RBP18.13■□□□□ 0.49
SGMS1-208ENST00000608287 OR9A4Q8NGU2 314 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 ZCCHC10Q8TBK6 192 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 KIAA1191Q96A73 305 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 RHOXF2Q9BQY4 288 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■■□□ 19
SGMS1-208ENST00000608287 SPNS1Q9H2V7 528 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 ALG9Q9H6U8 611 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 PELI2Q9HAT8 420 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 NMRAL1Q9HBL8 299 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 CD274Q9NZQ7 290 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 NFU1Q9UMS0 254 aa18.13■□□□□ 0.49
SGMS1-208ENST00000608287 S100BP04271 92 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-208ENST00000608287 LTA4HP09960 611 aaKnown RBP18.12■□□□□ 0.49
SGMS1-208ENST00000608287 ACPPP15309 386 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 TFEBP19484 476 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 SLC6A12P48065 614 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 SNRPNP63162 240 aaKnown RBP18.12■□□□□ 0.49
SGMS1-208ENST00000608287 DLG1Q12959 904 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 SYT16Q17RD7 645 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 FBXO48Q5FWF7 155 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 TMEM214Q6NUQ4 689 aaKnown RBP18.12■□□□□ 0.49
SGMS1-208ENST00000608287 PRSS41Q7RTY9 318 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 AIF1LQ9BQI0 150 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 SARGQ9BW04 601 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 CNOT10Q9H9A5 744 aaKnown RBP18.12■□□□□ 0.49
SGMS1-208ENST00000608287 MKKSQ9NPJ1 570 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-208ENST00000608287 C3orf18Q9UK00 162 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 ACOT9Q9Y305 439 aa18.12■□□□□ 0.49
SGMS1-208ENST00000608287 IGLV3-12A0A075B6K2 115 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 TAPBPO15533 448 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 NDUFS4O43181 175 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 KLHL18O94889 574 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 INHBAP08476 426 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 IL1RNP18510 177 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 GNAZP19086 355 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 HSPA7P48741 367 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 ADORA2A-AS1P86434 159 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 MAT1AQ00266 395 aaKnown RBP18.11■□□□□ 0.49
SGMS1-208ENST00000608287 REEP5Q00765 189 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 Q0VFX4 171 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 CDKL4Q5MAI5 379 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 SULT1C3Q6IMI6 304 aa18.11■□□□□ 0.49
SGMS1-208ENST00000608287 LAPTM4BQ86VI4 370 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms