RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 RBM38Q9H0Z9 239 aaKnown RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 FOXP1Q9H334 677 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ZNF430Q9H8G1 570 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 FZD3Q9NPG1 666 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ARHGEF3Q9NR81 526 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 HCFC1R1Q9NWW0 138 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 NLGN3Q9NZ94 848 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 GCNT4Q9P109 453 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 PEF1Q9UBV8 284 aaKnown RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 TBC1D24Q9ULP9 559 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 PSMD13Q9UNM6 376 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 CA5BQ9Y2D0 317 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 TNFRSF18Q9Y5U5 241 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ZNF541Q9H0D2 1346 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 A0A1W2PRU2 124 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ELOVL7A1L3X0 281 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 C9orf170A2RU37 121 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 FAM149AA5PLN7 773 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SERPINE3A8MV23 424 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SURF4O15260 269 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 FLRT2O43155 660 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 IFNA4P05014 189 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 DRD2P14416 443 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 DCKP27707 260 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 UGT1A3P35503 534 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 UGT1A5P35504 534 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 RPL5P46777 297 aaKnown RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ARRB1P49407 418 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SLC5A3P53794 718 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 UCP2P55851 309 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 HERV-K104P63124 156 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 TNFRSF9Q07011 255 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 DLG1Q12959 904 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 OXA1LQ15070 435 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 LRFN4Q6PJG9 635 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SH2D5Q6ZV89 423 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 LRRC70Q7Z2Q7 622 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 REC114Q7Z4M0 266 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 CCDC71Q8IV32 467 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SLC35F3Q8IY50 421 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SYNE4Q8N205 404 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 WDSUB1Q8N9V3 476 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 TMEM35BQ8NCS4 154 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SCAMP5Q8TAC9 235 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 C16orf78Q8WTQ4 265 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 MISP3Q96FF7 219 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 FBXL20Q96IG2 436 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 QKIQ96PU8 341 aaKnown RBP eCLIP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 MCCC1Q96RQ3 725 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 SYT17Q9BSW7 474 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ALKBH7Q9BT30 221 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 IMP3Q9NV31 184 aaKnown RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ZNF282Q9UDV7 671 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 LEF1Q9UJU2 399 aaPredicted RBP5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 KCNK6Q9Y257 313 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 TCAF1Q9Y4C2 921 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 ASB1Q9Y576 335 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 U3KQV3 271 aa5.6□□□□□ -1.51
COL4A3BP-207ENST00000604926 TRAV25A0A0B4J276 109 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 NPIPB15A6NHN6 443 aaPredicted RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 CBY3A6NI87 242 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 CLCA1A8K7I4 914 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 KCNU1A8MYU2 1149 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 FOXN1O15353 648 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 MSI1O43347 362 aaKnown RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 LRCH4O75427 683 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 TOP3BO95985 862 aaKnown RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 LCATP04180 440 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 TRIM49P0CI25 452 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 TRIM49CP0CI26 452 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 COX4I1P13073 169 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 ZNF18P17022 549 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 ME2P23368 584 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 SSTR2P30874 369 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 GRK5P34947 590 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 THBS4P35443 961 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 YAP1P46937 504 aaKnown RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 KIAA1024LP59773 190 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 IL9RQ01113 521 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 GOLGA7BQ2TAP0 167 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 ANKRD26P1Q6NSI1 321 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 USP45Q70EL2 814 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 EIF3MQ7L2H7 374 aaKnown RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 HDDC2Q7Z4H3 204 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 HAUS6Q7Z4H7 955 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 ABHD12BQ7Z5M8 362 aaPredicted RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 TFAP2DQ7Z6R9 452 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 KLHL7Q8IXQ5 586 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 CCDC197Q8NCU1 140 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 SDR42E1Q8WUS8 393 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 CPNE2Q96FN4 548 aaPredicted RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 OCSTAMPQ9BR26 566 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 MED18Q9BUE0 208 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 CPEB1Q9BZB8 566 aaKnown RBP5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 TRIM31Q9BZY9 425 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 CSTL1Q9H114 145 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 BCAS3Q9H6U6 928 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 MED20Q9H944 212 aa5.59□□□□□ -1.51
COL4A3BP-207ENST00000604926 GPAMQ9HCL2 828 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms