RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GPR22Q99680 433 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 RBBP8Q99708 897 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 RBCK1Q9BYM8 510 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 EHD1Q9H4M9 534 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 GRHL1Q9NZI5 618 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 PSMD12O00232 456 aaPredicted RBP14.84□□□□□ -0.03
VRK3-221ENST00000600284 CCDC166P0CW27 439 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 CD1DP15813 335 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 CASQ1P31415 396 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 HNF4AP41235 474 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 GDF5P43026 501 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 SLC26A5P58743 744 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 RAB8AP61006 207 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 OLR1P78380 273 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 MRPS25P82663 173 aaKnown RBP14.84□□□□□ -0.03
VRK3-221ENST00000600284 TUBA3CQ13748 450 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 ZNF766Q5HY98 468 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 GRTP1Q5TC63 336 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 SULT1C3Q6IMI6 304 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 TUBA3EQ6PEY2 450 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 TMIGD1Q6UXZ0 262 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 GPSM1Q86YR5 675 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 CRLF3Q8IUI8 442 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 HORMAD2Q8N7B1 307 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 AMER2Q8N7J2 671 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 ARMC2Q8NEN0 867 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 RELTQ969Z4 430 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 UBXN10Q96LJ8 280 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 UTP23Q9BRU9 249 aaKnown RBP14.84□□□□□ -0.03
VRK3-221ENST00000600284 NPLQ9BXD5 320 aaPredicted RBP14.84□□□□□ -0.03
VRK3-221ENST00000600284 RAB17Q9H0T7 212 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 KLHL31Q9H511 634 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 CAB39LQ9H9S4 337 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 PRDM9Q9NQV7 894 aa14.84□□□□□ -0.03
VRK3-221ENST00000600284 UTP20O75691 2785 aaKnown RBP14.84□□□□□ -0.03
VRK3-221ENST00000600284 A0A088AWK7 358 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 IGKV3D-11A0A0A0MRZ8 115 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 TCRBV16S1A1N1A0A5B0 115 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 CTAGE15A4D2H0 777 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 TAPBPO15533 448 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 B4GALT2O60909 372 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 CLEC3AO75596 197 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 STK16O75716 305 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 PIAS1O75925 651 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 B3GALT4O96024 378 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 ZNF10P21506 573 aaPredicted RBP14.83□□□□□ -0.04
VRK3-221ENST00000600284 SPRP35270 261 aaPredicted RBP14.83□□□□□ -0.04
VRK3-221ENST00000600284 GPX6P59796 221 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 ETF1P62495 437 aaKnown RBP14.83□□□□□ -0.04
VRK3-221ENST00000600284 ZKSCAN8Q15776 578 aaPredicted RBP14.83□□□□□ -0.04
VRK3-221ENST00000600284 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.83□□□□□ -0.04
VRK3-221ENST00000600284 TOR1AIP1Q5JTV8 583 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 FCRLBQ6BAA4 426 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 HIST2H2BCQ6DN03 193 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 CTAGE6Q86UF2 777 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 CA13Q8N1Q1 262 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 MDS2Q8NDY4 140 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 GAL3ST3Q96A11 431 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 KIAA1191Q96A73 305 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 FAR2Q96K12 515 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 DNAJC11Q9NVH1 559 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 WWOXQ9NZC7 414 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 MMACHCQ9Y4U1 282 aa14.83□□□□□ -0.04
VRK3-221ENST00000600284 LRIT2A6NDA9 550 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 SYNDIG1LA6NDD5 238 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 ANKDD1BA6NHY2 528 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 NCF1BA6NI72 391 aaPredicted RBP14.82□□□□□ -0.04
VRK3-221ENST00000600284 NCF1CA8MVU1 366 aaPredicted RBP14.82□□□□□ -0.04
VRK3-221ENST00000600284 CLGNO14967 610 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 C1QAP02745 245 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 NCF1P14598 390 aaPredicted RBP14.82□□□□□ -0.04
VRK3-221ENST00000600284 CD96P40200 585 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 PLTPP55058 493 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 RAB10P61026 200 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 BTN3A2P78410 334 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 BTG2P78543 158 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 C2orf54Q08AI8 447 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 SLBPQ14493 270 aaKnown RBP eCLIP14.82□□□□□ -0.04
VRK3-221ENST00000600284 C18orf21Q32NC0 220 aaPredicted RBP14.82□□□□□ -0.04
VRK3-221ENST00000600284 ADPRMQ3LIE5 342 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 GFRALQ6UXV0 394 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 RPS19BP1Q86WX3 136 aaKnown RBP14.82□□□□□ -0.04
VRK3-221ENST00000600284 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.82□□□□□ -0.04
VRK3-221ENST00000600284 PDPRQ8NCN5 879 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 ADAMTS18Q8TE60 1221 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 MS4A6EQ96DS6 147 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 WDR34Q96EX3 536 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 SCMH1Q96GD3 660 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 NPAS2Q99743 824 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 TMEM79Q9BSE2 394 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 AICDAQ9GZX7 198 aa14.82□□□□□ -0.04
VRK3-221ENST00000600284 PTBP2Q9UKA9 531 aaKnown RBP14.82□□□□□ -0.04
VRK3-221ENST00000600284 ZGRF1Q86YA3 2104 aa14.81□□□□□ -0.04
VRK3-221ENST00000600284 SAGE2PA6NJ88 616 aa14.81□□□□□ -0.04
VRK3-221ENST00000600284 GABRR3A8MPY1 467 aa14.81□□□□□ -0.04
VRK3-221ENST00000600284 C4orf51C9J302 202 aa14.81□□□□□ -0.04
VRK3-221ENST00000600284 PHGDHO43175 533 aaKnown RBP14.81□□□□□ -0.04
VRK3-221ENST00000600284 MLYCDO95822 493 aa14.81□□□□□ -0.04
VRK3-221ENST00000600284 CD46P15529 392 aa14.81□□□□□ -0.04
VRK3-221ENST00000600284 STX2P32856 288 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms