RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SRFBP1Q8NEF9 429 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 OR2T11Q8NH01 316 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ZCCHC10Q8TBK6 192 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 PROKR1Q8TCW9 393 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 CHTF18Q8WVB6 975 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 C19orf60Q96EN9 201 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 C11orf24Q96F05 449 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 C3orf30Q96M34 536 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 KCNC2Q96PR1 638 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 TBCDQ9BTW9 1192 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 PRDM7Q9NQW5 492 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 NMRK1Q9NWW6 199 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SIRT5Q9NXA8 310 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 DHCR7Q9UBM7 475 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 VTI1BQ9UEU0 232 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ACSL6Q9UKU0 697 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC12A4Q9UP95 1085 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 MSRB2Q9Y3D2 182 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 CACNA1AO00555 2505 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 KIF26BQ2KJY2 2108 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 A0A1B0GX78 115 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 SAP18O00422 153 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 RTCAO00442 366 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 SKAP2O75563 359 aaPredicted RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 STK17BO94768 372 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 KIAA0754O94854 1291 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 KLHL18O94889 574 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 TGDSO95455 350 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 B3GALT4O96024 378 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 PRR35P0CG20 571 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 KITP10721 976 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 IL1RNP18510 177 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 RBMS1P29558 406 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC5A2P31639 672 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 LSP1P33241 339 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 BSGP35613 385 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 TSFMP43897 325 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 PLA2G16P53816 162 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 SHC2P98077 582 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 TGM3Q08188 693 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 COL9A2Q14055 689 aaPredicted RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 MAP7Q14244 749 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 KIAA0040Q15053 153 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 PDCD2Q16342 344 aaPredicted RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 DEFB134Q4QY38 66 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 NIPAL1Q6NVV3 410 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 PRMT9Q6P2P2 845 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 TRIM40Q6P9F5 258 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF517Q6ZMY9 492 aaPredicted RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF793Q6ZN11 406 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 TTLL10Q6ZVT0 673 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 DDIASQ8IXT1 998 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 OR9A4Q8NGU2 314 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 RGMAQ96B86 450 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 NXPE2Q96DL1 559 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 APIPQ96GX9 242 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 METTL2AQ96IZ6 378 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 C17orf62Q9BQA9 187 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 CENPKQ9BS16 269 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 MRPL1Q9BYD6 325 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 NUF2Q9BZD4 464 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 ULBP3Q9BZM4 244 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 MEAF6Q9HAF1 191 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 CLK4Q9HAZ1 481 aaKnown RBP12□□□□□ -0.49
CHMP2A-206ENST00000600118 PFDN4Q9NQP4 134 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC22A11Q9NSA0 550 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 USH1CQ9Y6N9 552 aa12□□□□□ -0.49
CHMP2A-206ENST00000600118 A0A0A6YYC8 382 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 A0A0G2JN53 185 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 H0YIG0 161 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 I3L1I5 382 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 MEN1O00255 615 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 SDHDO14521 159 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 LSM1O15116 133 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 RGS14O43566 566 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 BRINP1O60477 761 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 HIST1H1TP22492 207 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 ATP5A1P25705 553 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 CD82P27701 267 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 MTTPP55157 894 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 BTN3A2P78410 334 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 DSG2Q14126 1118 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 IMPG1Q17R60 797 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 OR4C11Q6IEV9 310 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 GALNT18Q6P9A2 607 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 TIPARPQ7Z3E1 657 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 COMMD6Q7Z4G1 85 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 LRRC34Q8IZ02 419 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 DSELQ8IZU8 1212 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 ZCCHC7Q8N3Z6 543 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 AMER3Q8N944 861 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 RNF31Q96EP0 1072 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 MAELQ96JY0 434 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 FCRL1Q96LA6 429 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 PPP3R2Q96LZ3 170 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 SORBS1Q9BX66 1292 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 ROGDIQ9GZN7 287 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 DDX31Q9H8H2 851 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms