RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 C1orf105O95561 183 aa13□□□□□ -0.33
IRF3-225ENST00000600022 TSPAN12O95859 305 aa13□□□□□ -0.33
IRF3-225ENST00000600022 SERPINE1P05121 402 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ST13P50502 369 aaKnown RBP13□□□□□ -0.33
IRF3-225ENST00000600022 TDGF1P3P51864 188 aa13□□□□□ -0.33
IRF3-225ENST00000600022 IL2P60568 153 aa13□□□□□ -0.33
IRF3-225ENST00000600022 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
IRF3-225ENST00000600022 DLG1Q12959 904 aa13□□□□□ -0.33
IRF3-225ENST00000600022 MFAP5Q13361 173 aa13□□□□□ -0.33
IRF3-225ENST00000600022 GBX1Q14549 363 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ZC3H12BQ5HYM0 836 aaKnown RBP13□□□□□ -0.33
IRF3-225ENST00000600022 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
IRF3-225ENST00000600022 FAAH2Q6GMR7 532 aa13□□□□□ -0.33
IRF3-225ENST00000600022 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ZYG11AQ6WRX3 759 aa13□□□□□ -0.33
IRF3-225ENST00000600022 SPATA21Q7Z572 469 aa13□□□□□ -0.33
IRF3-225ENST00000600022 CRLF3Q8IUI8 442 aa13□□□□□ -0.33
IRF3-225ENST00000600022 SLC22A9Q8IVM8 553 aa13□□□□□ -0.33
IRF3-225ENST00000600022 DCUN1D3Q8IWE4 304 aa13□□□□□ -0.33
IRF3-225ENST00000600022 OR2A1Q8NGT9 310 aa13□□□□□ -0.33
IRF3-225ENST00000600022 BRIX1Q8TDN6 353 aaKnown RBP13□□□□□ -0.33
IRF3-225ENST00000600022 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
IRF3-225ENST00000600022 FAM136AQ96C01 138 aa13□□□□□ -0.33
IRF3-225ENST00000600022 MAGEB10Q96LZ2 347 aaPredicted RBP13□□□□□ -0.33
IRF3-225ENST00000600022 C10orf90Q96M02 699 aa13□□□□□ -0.33
IRF3-225ENST00000600022 SLC30A3Q99726 388 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ELAC2Q9BQ52 826 aaKnown RBP13□□□□□ -0.33
IRF3-225ENST00000600022 DERL2Q9GZP9 239 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ZNF304Q9HCX3 659 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
IRF3-225ENST00000600022 SEMA3GQ9NS98 782 aa13□□□□□ -0.33
IRF3-225ENST00000600022 GALPQ9UBC7 116 aa13□□□□□ -0.33
IRF3-225ENST00000600022 XPR1Q9UBH6 696 aa13□□□□□ -0.33
IRF3-225ENST00000600022 C3orf18Q9UK00 162 aa13□□□□□ -0.33
IRF3-225ENST00000600022 TMCO1Q9UM00 188 aa13□□□□□ -0.33
IRF3-225ENST00000600022 ENTPD4Q9Y227 616 aa13□□□□□ -0.33
IRF3-225ENST00000600022 SYCE1LA8MT33 242 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 TMEM114B3SHH9 223 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 KPNA5O15131 536 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
IRF3-225ENST00000600022 SNUPNO95149 360 aaKnown RBP12.99□□□□□ -0.33
IRF3-225ENST00000600022 PIM1P11309 404 aaPredicted RBP12.99□□□□□ -0.33
IRF3-225ENST00000600022 COX6A1P12074 109 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 CD1DP15813 335 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 MST1P26927 711 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 EEF1A2Q05639 463 aaKnown RBP12.99□□□□□ -0.33
IRF3-225ENST00000600022 PCLAFQ15004 111 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 ZSCAN26Q16670 478 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 TECRLQ5HYJ1 363 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 TCTE1Q5JU00 501 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 CFAP157Q5JU67 520 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 LIPMQ5VYY2 423 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 UNC5DQ6UXZ4 953 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 C10orf107Q8IVU9 208 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 MCEMP1Q8IX19 187 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 CPNE9Q8IYJ1 553 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 SLC34A3Q8N130 599 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 TTC29Q8NA56 475 aaPredicted RBP12.99□□□□□ -0.33
IRF3-225ENST00000600022 OR2L3Q8NG85 312 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 ZUFSPQ96AP4 578 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 SLC22A18Q96BI1 424 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 MIEF2Q96C03 454 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 SEC16BQ96JE7 1060 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 LMF1Q96S06 567 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 MECRQ9BV79 373 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 ACAT2Q9BWD1 397 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 EPS8L2Q9H6S3 715 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 OLAHQ9NV23 265 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 THAP1Q9NVV9 213 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 ZNF358Q9NW07 568 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 KLHL14Q9P2G3 628 aa12.99□□□□□ -0.33
IRF3-225ENST00000600022 CPSF2Q9P2I0 782 aaKnown RBP12.99□□□□□ -0.33
IRF3-225ENST00000600022 PABPN1LA6NDY0 278 aaKnown RBP12.98□□□□□ -0.33
IRF3-225ENST00000600022 ERICH4A6NGS2 130 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 TARM1B6A8C7 271 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 H0YGG7 62 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 PCDH17O14917 1159 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 SRPX2O60687 465 aaPredicted RBP12.98□□□□□ -0.33
IRF3-225ENST00000600022 HPP00738 406 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 SNRPB2P08579 225 aaKnown RBP12.98□□□□□ -0.33
IRF3-225ENST00000600022 PRR35P0CG20 571 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 ENO3P13929 434 aaPredicted RBP12.98□□□□□ -0.33
IRF3-225ENST00000600022 ACPPP15309 386 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 TFEBP19484 476 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 ATP5F1P24539 256 aaPredicted RBP12.98□□□□□ -0.33
IRF3-225ENST00000600022 SOX11P35716 441 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 TNFSF10P50591 281 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
IRF3-225ENST00000600022 ARG2P78540 354 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 SYT16Q17RD7 645 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 HKDC1Q2TB90 917 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 FAM214AQ32MH5 1076 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 IRAK1BP1Q5VVH5 260 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 FAM180AQ6UWF9 173 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 SUSD1Q6UWL2 747 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 OTOAQ7RTW8 1153 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 KIRREL3Q8IZU9 778 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 RHEBL1Q8TAI7 183 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 STAG3L4Q8TBR4 150 aa12.98□□□□□ -0.33
IRF3-225ENST00000600022 ITLN2Q8WWU7 325 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms