RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CNPY4Q8N129 248 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 ACTR8Q9H981 624 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.62■■□□□ 1.85
SSBP4-206ENST00000599699 PCDHGB7Q9Y5F8 929 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 V9GYY5 206 aaPredicted RBP26.62■■□□□ 1.85
SSBP4-206ENST00000599699 NSG1A0A0A6YYJ2 146 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 A0A0G2JN53 185 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 SMIM23A6NLE4 172 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 KLHL41O60662 606 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 DNAJB6O75190 326 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 CDC123O75794 336 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-206ENST00000599699 ALPPP05187 535 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 SMIM10L1P0DMW3 83 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 HNRNPH1P31943 449 aaKnown RBP26.61■■□□□ 1.85
SSBP4-206ENST00000599699 ARL1P40616 181 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-206ENST00000599699 COLEC12Q5KU26 742 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 VWA5B1Q5TIE3 1220 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 NDUFAF7Q7L592 441 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 GOLGA7Q7Z5G4 137 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 VN1R5Q7Z5H4 357 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 TBC1D20Q96BZ9 403 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 MS4A6EQ96DS6 147 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 SMIM10Q96HG1 83 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 OR1F2PQ96R84 312 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 REXO4Q9GZR2 422 aaKnown RBP26.61■■□□□ 1.85
SSBP4-206ENST00000599699 AICDAQ9GZX7 198 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 RHBGQ9H310 441 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 IPPKQ9H8X2 491 aa26.61■■□□□ 1.85
SSBP4-206ENST00000599699 OR2W5A6NFC9 320 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 C4orf51C9J302 202 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 GOLGA8RI6L899 631 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 SUV39H1O43463 412 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 SLCO1A2P46721 670 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 PLA2G16P53816 162 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 GRHL2Q6ISB3 625 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 METTL2BQ6P1Q9 378 aaKnown RBP26.6■■□□□ 1.85
SSBP4-206ENST00000599699 TRIM40Q6P9F5 258 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 ATG14Q6ZNE5 492 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 ATP6V1E2Q96A05 226 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 CLK4Q9HAZ1 481 aaKnown RBP26.6■■□□□ 1.85
SSBP4-206ENST00000599699 ANAPC2Q9UJX6 822 aa26.6■■□□□ 1.85
SSBP4-206ENST00000599699 A0A088AWK7 358 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 PSMD12O00232 456 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-206ENST00000599699 FHP07954 510 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 CYC1P08574 325 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 COX6A1P12074 109 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 ZNF10P21506 573 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-206ENST00000599699 EFNA3P52797 238 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 SOX8P57073 446 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 PCDH1Q08174 1060 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 TGM3Q08188 693 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 E2F2Q14209 437 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 TMEM205Q6UW68 189 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 OR2L5Q8NG80 312 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 ACMSDQ8TDX5 336 aa26.59■■□□□ 1.85
SSBP4-206ENST00000599699 THOC3Q96J01 351 aaKnown RBP26.59■■□□□ 1.85
SSBP4-206ENST00000599699 SMAD5Q99717 465 aaKnown RBP26.59■■□□□ 1.85
SSBP4-206ENST00000599699 C19orf25Q9UFG5 118 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-206ENST00000599699 IGHV1-45A0A0A0MS14 117 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 STX16-NPEPL1H3BU86 382 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 E2F3O00716 465 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 STX16O14662 325 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 B4GALT2O60909 372 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 PYGBP11216 843 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 RNH1P13489 461 aaKnown RBP26.58■■□□□ 1.85
SSBP4-206ENST00000599699 JAK1P23458 1154 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 DDX39BQ13838 428 aaKnown RBP26.58■■□□□ 1.85
SSBP4-206ENST00000599699 LIPJQ5W064 366 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 LANCL3Q6ZV70 420 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 LCA5Q86VQ0 697 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 LAS2Q8IYD9 372 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 OR7G3Q8NG95 312 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 F2RL3Q96RI0 385 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 LHPPQ9H008 270 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 NOL11Q9H8H0 719 aaKnown RBP26.58■■□□□ 1.85
SSBP4-206ENST00000599699 COPS7BQ9H9Q2 264 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-206ENST00000599699 PPCSQ9HAB8 311 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 RIC8BQ9NVN3 520 aa26.58■■□□□ 1.85
SSBP4-206ENST00000599699 LOC102723996A0A087X1L8 192 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 DPM1O60762 260 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 PLA2G2AP14555 144 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 TAC1P20366 129 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 SERPINB1P30740 379 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 HSD17B3P37058 310 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 ABRAXAS2Q15018 415 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 NSDHLQ15738 373 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 KBTBD2Q8IY47 623 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 ZNF473Q8WTR7 871 aaKnown RBP26.57■■□□□ 1.84
SSBP4-206ENST00000599699 ZNF700Q9H0M5 742 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 ZNF552Q9H707 407 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-206ENST00000599699 LANCL2Q9NS86 450 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 TMEM216Q9P0N5 145 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 C5AR2Q9P296 337 aa26.57■■□□□ 1.84
SSBP4-206ENST00000599699 B3GALT2O43825 422 aa26.56■■□□□ 1.84
SSBP4-206ENST00000599699 SH3BGRLO75368 114 aa26.56■■□□□ 1.84
SSBP4-206ENST00000599699 TBX6O95947 436 aaPredicted RBP26.56■■□□□ 1.84
SSBP4-206ENST00000599699 KRT15P19012 456 aa26.56■■□□□ 1.84
SSBP4-206ENST00000599699 CCNG1P51959 295 aa26.56■■□□□ 1.84
SSBP4-206ENST00000599699 RHAGQ02094 409 aa26.56■■□□□ 1.84
SSBP4-206ENST00000599699 Q0VFX4 171 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms