RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 NPEPPSL1A6NEC2 478 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 SAGE2PA6NJ88 616 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 A8MUA0 341 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ASNA1O43681 348 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 NME2P1O60361 137 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 MLYCDO95822 493 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ABOP16442 354 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ZNF24P17028 368 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 SAT1P21673 171 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 NME2P22392 152 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 PTGER4P35408 488 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ELK3P41970 407 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 SMSP52788 366 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ITGA8P53708 1063 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 MLF1P58340 268 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 SKP1P63208 163 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 HYAL2Q12891 473 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ZNF460Q14592 562 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 PPP1R3AQ16821 1122 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 KRTCAP3Q53RY4 240 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 QSOX2Q6ZRP7 698 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 FGD2Q7Z6J4 655 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 GALNT7Q86SF2 657 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 THOC6Q86W42 341 aaKnown RBP9.86□□□□□ -0.83
LSM4-205ENST00000597776 CHERPQ8IWX8 916 aaKnown RBP9.86□□□□□ -0.83
LSM4-205ENST00000597776 TBC1D19Q8N5T2 526 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 CPSF7Q8N684 471 aaKnown RBP9.86□□□□□ -0.83
LSM4-205ENST00000597776 HORMAD2Q8N7B1 307 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 FAM98AQ8NCA5 519 aaKnown RBP9.86□□□□□ -0.83
LSM4-205ENST00000597776 NFAM1Q8NET5 270 aaPredicted RBP9.86□□□□□ -0.83
LSM4-205ENST00000597776 AGAP11Q8TF27 550 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 ATL1Q8WXF7 558 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 LURAP1Q96LR2 239 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 NAT9Q9BTE0 207 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 SLC6A16Q9GZN6 736 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 AICDAQ9GZX7 198 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 NECTIN3Q9NQS3 549 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 SNX12Q9UMY4 172 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 MEMO1Q9Y316 297 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 VWA7Q9Y334 891 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 PSAT1Q9Y617 370 aa9.86□□□□□ -0.83
LSM4-205ENST00000597776 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 A0A0G2JN53 185 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 TCRBV16S1A1N1A0A5B0 115 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 PSMD12O00232 456 aaPredicted RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 CDC7O00311 574 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 ENO2P09104 434 aaPredicted RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 RNH1P13489 461 aaKnown RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 ZNF37AP17032 561 aaPredicted RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 IVDP26440 423 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 PTGER1P34995 402 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 AHRP35869 848 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 RFC3P40938 356 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 CYB561P49447 251 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 RBBP5Q15291 538 aaKnown RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 C18orf21Q32NC0 220 aaPredicted RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 TOR1AIP1Q5JTV8 583 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 FAM45BPQ6NSW5 357 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 NXPE4Q6UWF7 544 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 DOLPP1Q86YN1 238 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.85□□□□□ -0.83
LSM4-205ENST00000597776 ZNF295-AS1Q8N0V1 137 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 GHDCQ8N2G8 530 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 FAM45AQ8TCE6 357 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 CREB3L4Q8TEY5 395 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 MTFMTQ96DP5 389 aaKnown RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 AIF1LQ9BQI0 150 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 PELI2Q9HAT8 420 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 ZFATQ9P243 1243 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 SLC22A14Q9Y267 594 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 DYRK1BQ9Y463 629 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
LSM4-205ENST00000597776 PCNX1Q96RV3 2341 aa9.85□□□□□ -0.83
LSM4-205ENST00000597776 PKDREJQ9NTG1 2253 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 TRBV11-1A0A0K0K1C0 115 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 TGFBR3LH3BV60 316 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 ADAM10O14672 748 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 MYO1DO94832 1006 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 CLDN14O95500 239 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 SMIM10L1P0DMW3 83 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 AGAP20933 346 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 PPP2R1BP30154 601 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 TRHRP34981 398 aaPredicted RBP9.84□□□□□ -0.83
LSM4-205ENST00000597776 KIR3DL1P43629 444 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 MEOX1P50221 254 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 HLCSP50747 726 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 BTN3A2P78410 334 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 STEAP4Q687X5 459 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 NIPAL1Q6NVV3 410 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 ANKMY2Q8IV38 441 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 PDIK1LQ8N165 341 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 CA13Q8N1Q1 262 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 TRPV3Q8NET8 790 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 SLCO2A1Q92959 643 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 TMEM125Q96AQ2 219 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 PDLIM5Q96HC4 596 aaKnown RBP9.84□□□□□ -0.83
LSM4-205ENST00000597776 SMIM10Q96HG1 83 aa9.84□□□□□ -0.83
LSM4-205ENST00000597776 PDLIM2Q96JY6 352 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms