RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 EPS8L3Q8TE67 593 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 PPP4R1Q8TF05 950 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 MS4A6EQ96DS6 147 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CMTM7Q96FZ5 175 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CENPKQ9BS16 269 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 NPLQ9BXD5 320 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 TRIM55Q9BYV6 548 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 NOL11Q9H8H0 719 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 C19orf25Q9UFG5 118 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 FBXL4Q9UKA2 621 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 RAB21Q9UL25 225 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 GRID1Q9ULK0 1009 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 TSC22D4Q9Y3Q8 395 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 IGSF10Q6WRI0 2623 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 A0A1W2PPM1 405 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF860A6NHJ4 632 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 LRRC14BA6NHZ5 514 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 A8MT66 165 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 ERI3O43414 337 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 CHST10O43529 356 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 ALOX12BO75342 701 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 ATP5F1P24539 256 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 PIK3CBP42338 1070 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 BTN3A2P78410 334 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 AIMP2Q13155 320 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 RCN2Q14257 317 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 ADPRMQ3LIE5 342 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 NDUFAF7Q7L592 441 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 TMEM151AQ8N4L1 468 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 MREGQ8N565 214 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 L3MBTL4Q8NA19 623 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF473Q8WTR7 871 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 TBC1D20Q96BZ9 403 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 CCDC126Q96EE4 140 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 PEX11GQ96HA9 241 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 NTMT1Q9BV86 223 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 SEMA4CQ9C0C4 833 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 COPS7BQ9H9Q2 264 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 PCTPQ9UKL6 214 aa16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 MDC1Q14676 2089 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-212ENST00000596163 H0YIV9 168 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 COPEO14579 308 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 B3GALT2O43825 422 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 CEACAM4O75871 244 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 DNAJB5O75953 348 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 HPP00738 406 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 FHP07954 510 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 SBK3P0C264 359 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 C8orf89P0DMQ9 161 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 RNH1P13489 461 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 HNRNPH1P31943 449 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 CRHR1P34998 444 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 PGDP52209 483 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 PLA2G16P53816 162 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 SOX8P57073 446 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 AP2B1P63010 937 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 SNRPNP63162 240 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 CCDC153Q494R4 210 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 C10orf62Q5T681 223 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 VN1R5Q7Z5H4 357 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 HPS6Q86YV9 775 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 CYP4X1Q8N118 509 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 GALNT16Q8N428 558 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 PLPP5Q8NEB5 264 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 OR11G2Q8NGC1 345 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 ADAMTS18Q8TE60 1221 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 SERINC2Q96SA4 455 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 TBCDQ9BTW9 1192 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 C1QTNF3Q9BXJ4 246 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 GPR83Q9NYM4 423 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF451Q9Y4E5 1061 aa16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 HEMK1Q9Y5R4 338 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-212ENST00000596163 CACNA1GO43497 2377 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 NSG1A0A0A6YYJ2 146 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 A6NL46 340 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 OTCP00480 354 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 PRB1P04280 392 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ALPPP05187 535 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 RPS17P08708 135 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ICAM2P13598 275 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 KRT4P19013 534 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 IMPDH1P20839 514 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 PTX3P26022 381 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 MTTPP55157 894 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 NAA20P61599 178 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 HERVK_113P63132 956 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 NFATC3Q12968 1075 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 CPSF6Q16630 551 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 AP5B1Q2VPB7 878 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 TMEM205Q6UW68 189 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 SH2D5Q6ZV89 423 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ASB18Q6ZVZ8 466 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 MILR1Q7Z6M3 343 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 TMEM151BQ8IW70 566 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF843Q8N446 348 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 OR5T3Q8NGG3 340 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
SHKBP1-212ENST00000596163 HUS1BQ8NHY5 278 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms