RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 LRRTM2O43300 516 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 LCMT2O60294 686 aaKnown RBP16.88■□□□□ 0.29
HOMER3-208ENST00000595756 RDH16O75452 317 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 SEC24DO94855 1032 aaPredicted RBP16.88■□□□□ 0.29
HOMER3-208ENST00000595756 SNRPAP09012 282 aaKnown RBP16.88■□□□□ 0.29
HOMER3-208ENST00000595756 CCDC166P0CW27 439 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 NPPBP16860 134 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 IL10P22301 178 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 DCTP40126 519 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 CCR8P51685 355 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 SKP1P63208 163 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 ZNF460Q14592 562 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 HERC3Q15034 1050 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 ZXDCQ2QGD7 858 aaPredicted RBP16.88■□□□□ 0.29
HOMER3-208ENST00000595756 ANKRD37Q7Z713 158 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 AFAP1L2Q8N4X5 818 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 OR4K1Q8NGD4 311 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 SUN3Q8TAQ9 357 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 DCAKDQ8WVC6 231 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 ATL1Q8WXF7 558 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 ALKBH8Q96BT7 664 aaKnown RBP16.88■□□□□ 0.29
HOMER3-208ENST00000595756 FBXL8Q96CD0 374 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 EPB41L4BQ9H329 900 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 NMRAL1Q9HBL8 299 aa16.88■□□□□ 0.29
HOMER3-208ENST00000595756 TRBC2A0A5B9 178 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 NDUFS4O43181 175 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 CDKL1Q00532 357 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 ZNF33BQ06732 778 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 PWP1Q13610 501 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 BMPR2Q13873 1038 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 EXT1Q16394 746 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 FAM83EQ2M2I3 478 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 BTBD16Q32M84 506 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 ZNF787Q6DD87 383 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 NIPAL1Q6NVV3 410 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 TBC1D19Q8N5T2 526 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 ANKRD49Q8WVL7 239 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 ISL2Q96A47 359 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 PYCR2Q96C36 320 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 OR4K3Q96R72 315 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 SNX15Q9NRS6 342 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 ABI3Q9P2A4 366 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 PSMC3IPQ9P2W1 217 aaPredicted RBP16.87■□□□□ 0.29
HOMER3-208ENST00000595756 NAALAD2Q9Y3Q0 740 aa16.87■□□□□ 0.29
HOMER3-208ENST00000595756 CSMD1Q96PZ7 3565 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 IGHV3-20A0A0C4DH32 117 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 A0A1B0GUH1 482 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 HMX2A2RU54 273 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 PRAMEF2O60811 474 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 F10P00742 488 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 CRYABP02511 175 aaKnown RBP16.86■□□□□ 0.29
HOMER3-208ENST00000595756 C2P06681 752 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 LTA4HP09960 611 aaKnown RBP16.86■□□□□ 0.29
HOMER3-208ENST00000595756 SLC35E2BP0CK96 405 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 COL8A1P27658 744 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 HSD17B3P37058 310 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 PGGT1BP53609 377 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 RHAGQ02094 409 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 CSHL1Q14406 222 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 PPP1R3AQ16821 1122 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 H3F3CQ6NXT2 135 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 KLC3Q6P597 504 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 SBSNQ6UWP8 590 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 FRA10AC1Q70Z53 315 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 CMC1Q7Z7K0 106 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 SHISA5Q8N114 240 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 MREGQ8N565 214 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 ZNF740Q8NDX6 193 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 DNAJB8Q8NHS0 232 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 LANCL2Q9NS86 450 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 OARD1Q9Y530 152 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 PCDHGB6Q9Y5F9 930 aa16.86■□□□□ 0.29
HOMER3-208ENST00000595756 A0A096LPK6 155 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 GALR3O60755 368 aaPredicted RBP16.85■□□□□ 0.29
HOMER3-208ENST00000595756 ERLIN1O75477 346 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 RASAL1O95294 804 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 COL6A2P12110 1019 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 CD1DP15813 335 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 HNMTP50135 292 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 MEF2AQ02078 507 aaPredicted RBP16.85■□□□□ 0.29
HOMER3-208ENST00000595756 RGS1Q08116 209 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 RASA2Q15283 850 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 ZRSR2Q15696 482 aaKnown RBP16.85■□□□□ 0.29
HOMER3-208ENST00000595756 CDKL4Q5MAI5 379 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 TIFABQ6ZNK6 161 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 TDRPQ86YL5 185 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 PLPP5Q8NEB5 264 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 STAG3L4Q8TBR4 150 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 M1APQ8TC57 530 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 NT5CQ8TCD5 201 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 SLC5A11Q8WWX8 675 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 KIAA1191Q96A73 305 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 ZNF354BQ96LW1 612 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 RBCK1Q9BYM8 510 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 MMP25Q9NPA2 562 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 STMN3Q9NZ72 180 aa16.85■□□□□ 0.29
HOMER3-208ENST00000595756 ZNF860A6NHJ4 632 aa16.84■□□□□ 0.29
HOMER3-208ENST00000595756 MAGEB17A8MXT2 336 aa16.84■□□□□ 0.29
HOMER3-208ENST00000595756 TRIM49D1C9J1S8 452 aa16.84■□□□□ 0.29
HOMER3-208ENST00000595756 CDC7O00311 574 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms