RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 ZC3H7AQ8IWR0 971 aaKnown RBP14.21□□□□□ -0.13
UPF1-202ENST00000594243 L3MBTL4Q8NA19 623 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 OR2L5Q8NG80 312 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 PPP4R1Q8TF05 950 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 ZNF473Q8WTR7 871 aaKnown RBP14.21□□□□□ -0.13
UPF1-202ENST00000594243 MS4A6EQ96DS6 147 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 CCDC126Q96EE4 140 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 ABHD17AQ96GS6 310 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 MAGEB10Q96LZ2 347 aaPredicted RBP14.21□□□□□ -0.13
UPF1-202ENST00000594243 OR1F2PQ96R84 312 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 SLC25A18Q9H1K4 315 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 ATP13A2Q9NQ11 1180 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 MKL2Q9ULH7 1088 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 G3BP2Q9UN86 482 aaKnown RBP14.21□□□□□ -0.13
UPF1-202ENST00000594243 TSC22D4Q9Y3Q8 395 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 HS3ST3B1Q9Y662 390 aa14.21□□□□□ -0.13
UPF1-202ENST00000594243 FOXO6A8MYZ6 492 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 OR7A17O14581 309 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 ERI3O43414 337 aaKnown RBP14.2□□□□□ -0.14
UPF1-202ENST00000594243 CHST10O43529 356 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 DLX3O60479 287 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 KLHL41O60662 606 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 RPS17P08708 135 aaKnown RBP14.2□□□□□ -0.14
UPF1-202ENST00000594243 IMPDH1P20839 514 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 JAK1P23458 1154 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 HNRNPH1P31943 449 aaKnown RBP14.2□□□□□ -0.14
UPF1-202ENST00000594243 PIK3CBP42338 1070 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 HERVK_113P63132 956 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 BTN3A2P78410 334 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 TUBB8Q3ZCM7 444 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 TMEM35AQ53FP2 167 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 DCAF10Q5QP82 559 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 KIRREL2Q6UWL6 708 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 MILR1Q7Z6M3 343 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 TMEM151BQ8IW70 566 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 OR5T3Q8NGG3 340 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 C9orf43Q8TAL5 461 aaPredicted RBP14.2□□□□□ -0.14
UPF1-202ENST00000594243 METTL21AQ8WXB1 218 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 CMTM7Q96FZ5 175 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 PEX11GQ96HA9 241 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 TMEM109Q9BVC6 243 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 NPLQ9BXD5 320 aaPredicted RBP14.2□□□□□ -0.14
UPF1-202ENST00000594243 ERVK-6Q9BXR3 956 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 TRIM55Q9BYV6 548 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 ROGDIQ9GZN7 287 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 PSD3Q9NYI0 1048 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 LGALS13Q9UHV8 139 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 PLAAQ9Y263 795 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 RNF11Q9Y3C5 154 aa14.2□□□□□ -0.14
UPF1-202ENST00000594243 ZNF860A6NHJ4 632 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 ALOX12BO75342 701 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 DNAJB5O75953 348 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 SUPT7LO94864 414 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 TBX6O95947 436 aaPredicted RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 B3GALT4O96024 378 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 OTCP00480 354 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 TGFB1P01137 390 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 ACPPP15309 386 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 PLA2G16P53816 162 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 PRKAA2P54646 552 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 NAA20P61599 178 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 SLC18A2Q05940 514 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 CHAF1BQ13112 559 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 AIMP2Q13155 320 aaKnown RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 CPSF6Q16630 551 aaKnown RBP eCLIP14.19□□□□□ -0.14
UPF1-202ENST00000594243 MINDY4Q4G0A6 757 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 ZNF678Q5SXM1 525 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 CPZQ66K79 652 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 ADNP2Q6IQ32 1131 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 TCTN3Q6NUS6 607 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 ABHD17CQ6PCB6 329 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 OR11G2Q8NGC1 345 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 OR52B6Q8NGF0 335 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 HUS1BQ8NHY5 278 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 ZNF483Q8TF39 744 aaPredicted RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 TBC1D20Q96BZ9 403 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 KCNC2Q96PR1 638 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 F2RL3Q96RI0 385 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 SERINC2Q96SA4 455 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 CENPKQ9BS16 269 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 TBCDQ9BTW9 1192 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 SLC25A23Q9BV35 468 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 MS4A8Q9BY19 250 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 AICDAQ9GZX7 198 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 COPS7BQ9H9Q2 264 aaPredicted RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 ZBTB26Q9HCK0 441 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 SEMA4BQ9NPR2 832 aaPredicted RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 C19orf25Q9UFG5 118 aaPredicted RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 PCDHGA9Q9Y5G4 932 aaKnown RBP14.19□□□□□ -0.14
UPF1-202ENST00000594243 KALRNO60229 2985 aa14.19□□□□□ -0.14
UPF1-202ENST00000594243 FER1L5A0AVI2 2057 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 PSMD12O00232 456 aaPredicted RBP14.18□□□□□ -0.14
UPF1-202ENST00000594243 B3GALT2O43825 422 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 ERLIN1O75477 346 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 JRKO75564 520 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 FHP07954 510 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 C8orf89P0DMQ9 161 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 MYL2P10916 166 aa14.18□□□□□ -0.14
UPF1-202ENST00000594243 RNH1P13489 461 aaKnown RBP14.18□□□□□ -0.14
UPF1-202ENST00000594243 PTX3P26022 381 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms