RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 IKBIPQ70UQ0 350 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 C19orf47Q8N9M1 422 aaKnown RBP19.81■□□□□ 0.76
PNKP-203ENST00000593946 GTF2H4Q92759 462 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 KCNC2Q96PR1 638 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 MAP3K3Q99759 626 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 HOPXQ9BPY8 73 aaPredicted RBP19.81■□□□□ 0.76
PNKP-203ENST00000593946 IL1RL2Q9HB29 575 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 SPAG4Q9NPE6 437 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 SLAMF8Q9P0V8 285 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 PADI4Q9UM07 663 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 MYO15AQ9UKN7 3530 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 GALR2O43603 387 aaPredicted RBP19.8■□□□□ 0.76
PNKP-203ENST00000593946 RASSF9O75901 435 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 COX7A2P14406 83 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 SSR2P43308 183 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 MAPK12P53778 367 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 OR1D5P58170 312 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 PGS1Q32NB8 556 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 PIGGQ5H8A4 983 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 DLEU7Q6UYE1 221 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 ZNF793Q6ZN11 406 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 GPR180Q86V85 440 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 TMEM132CQ8N3T6 1108 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 FBXW8Q8N3Y1 598 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 SRFBP1Q8NEF9 429 aaKnown RBP19.8■□□□□ 0.76
PNKP-203ENST00000593946 LOXL4Q96JB6 756 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 ATP6V1HQ9UI12 483 aa19.8■□□□□ 0.76
PNKP-203ENST00000593946 WBP11Q9Y2W2 641 aaKnown RBP19.8■□□□□ 0.76
PNKP-203ENST00000593946 LOC105369274A0A096LPK9 316 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 A0A0A6YYD5 115 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 LOC102723532A0A0G2JNH3 316 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 ARHGAP10A1A4S6 786 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 GABRR3A8MPY1 467 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 A8MUI8 341 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 P2RX6O15547 441 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 PDE5AO76074 875 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 EPN2O95208 641 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 SYPP08247 313 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 MYF5P13349 255 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 TSFMP43897 325 aaKnown RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 GSTM5P46439 218 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 GFERP55789 205 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 PDE7AQ13946 482 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 PRMT9Q6P2P2 845 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 TRIM40Q6P9F5 258 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 DHDDSQ86SQ9 333 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 OR4N4Q8N0Y3 316 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 EFCAB3Q8N7B9 438 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 KCT2Q8NC54 265 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 OR2I1PQ8NGU4 316 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 GAL3ST3Q96A11 431 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 REEP4Q9H6H4 257 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 FAM60AQ9NP50 221 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 SERHLQ9NQF3 203 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 PRDM7Q9NQW5 492 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 TMEM181Q9P2C4 612 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 MAN2B2Q9Y2E5 1009 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 BTBD3Q9Y2F9 522 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 LY6G6EA0A0G2JKS1 128 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 A0A0G2JN53 185 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 TLCD2A6NGC4 264 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 SLC9B1P1A6NJY1 282 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 H0YGG7 62 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 TMPRSS11DO60235 418 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 SH3BP5O60239 455 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 IL3P08700 152 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 FURINP09958 794 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 PIM1P11309 404 aaPredicted RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 SLC6A2P23975 617 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 MPLP40238 635 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 WNT3P56703 355 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 ARF3P61204 181 aaPredicted RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 GPLD1P80108 840 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 CEACAM7Q14002 265 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 CAPRIN1Q14444 709 aaKnown RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 NKAIN2Q5VXU1 208 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 OR4F3Q6IEY1 312 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 FAM92BQ6ZTR7 304 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 KIAA2013Q8IYS2 634 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 AMER3Q8N944 861 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 FAM181AQ8N9Y4 354 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 CAMKVQ8NCB2 501 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 NCSTNQ92542 709 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 RERGQ96A58 199 aaPredicted RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 COQ8BQ96D53 544 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 MTERF3Q96E29 417 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 TGM7Q96PF1 710 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 CD180Q99467 661 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 PRPF18Q99633 342 aaKnown RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 TBCDQ9BTW9 1192 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 FAM120CQ9NX05 1096 aaKnown RBP19.79■□□□□ 0.76
PNKP-203ENST00000593946 ABCD2Q9UBJ2 740 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 U3KQA8 63 aa19.79■□□□□ 0.76
PNKP-203ENST00000593946 CACNA1HO95180 2353 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 B4GAT1O43505 415 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 SIGLEC6O43699 453 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 KIF1CO43896 1103 aaKnown RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 SCN2BO60939 215 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 KCNH1O95259 989 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 LAMP1P11279 417 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms