RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GPRC5BQ9NZH0 403 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 XPR1Q9UBH6 696 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 DHCR7Q9UBM7 475 aaKnown RBP18.69■□□□□ 0.58
LSM4-203ENST00000593829 CROTQ9UKG9 612 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 SPTBP11277 2137 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 ZFHX4Q86UP3 3567 aa18.69■□□□□ 0.58
LSM4-203ENST00000593829 FEZF1A0PJY2 475 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 HYKKA2RU49 373 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 TXNDC9O14530 226 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 KLK8O60259 260 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 TCN2P20062 427 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 AGXTP21549 392 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 DLSTP36957 453 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 ALDH18A1P54886 795 aaKnown RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 MEF2AQ02078 507 aaPredicted RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 PFKFB4Q16877 469 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 PGM2L1Q6PCE3 622 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 FAM199XQ6PEV8 388 aaPredicted RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 TTLL10Q6ZVT0 673 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 LRRC70Q7Z2Q7 622 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 DHDDSQ86SQ9 333 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 TMPRSS11BQ86T26 416 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 EGFL6Q8IUX8 553 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 WDR75Q8IWA0 830 aaKnown RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 ST13P4Q8IZP2 240 aaPredicted RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 SNX31Q8N9S9 440 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 SARGQ9BW04 601 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 MRPL46Q9H2W6 279 aaKnown RBP18.68■□□□□ 0.58
LSM4-203ENST00000593829 TMCO1Q9UM00 188 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 COMMD3-BMI1R4GMX3 469 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 EPG5Q9HCE0 2579 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 EFSO43281 561 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 ALAS2P22557 587 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 GSTT1P30711 240 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 BCL6P41182 706 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 AGTR2P50052 363 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 ASPHQ12797 758 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 PRTGQ2VWP7 1150 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 CNPY1Q3B7I2 92 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 C1orf189Q5VU69 101 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 OR6Y1Q8NGX8 325 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 CT55Q8WUE5 264 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 AIF1LQ9BQI0 150 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 CHST8Q9H2A9 424 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 PCDHGA4Q9Y5G9 962 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 LAMA5O15230 3695 aa18.68■□□□□ 0.58
LSM4-203ENST00000593829 TRBC2A0A5B9 178 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 C21orf140B9A014 251 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 PEX1O43933 1283 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 LCMT2O60294 686 aaKnown RBP18.67■□□□□ 0.58
LSM4-203ENST00000593829 PABPC4LP0CB38 370 aaKnown RBP18.67■□□□□ 0.58
LSM4-203ENST00000593829 EMP3P54852 163 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 ZNF385CQ66K41 422 aaPredicted RBP18.67■□□□□ 0.58
LSM4-203ENST00000593829 C19orf48Q6RUI8 117 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 SLCO4C1Q6ZQN7 724 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 MFSD9Q8NBP5 474 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 CLPTM1LQ96KA5 538 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 NLNQ9BYT8 704 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 CPNE5Q9HCH3 593 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 NDUFA13Q9P0J0 144 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 OPTCQ9UBM4 332 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 NDOR1Q9UHB4 597 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 KCND3Q9UK17 655 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 ASB1Q9Y576 335 aa18.67■□□□□ 0.58
LSM4-203ENST00000593829 A0A1B0GX78 115 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 K7EPI3 171 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 DSCR3O14972 297 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 OR1F1O43749 312 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 H2AFYO75367 372 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 C1GALT1C1LP0DN25 315 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 ALOX15P16050 662 aaPredicted RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 CXCR2P25025 360 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 DCDP81605 110 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 DNASE1L3Q13609 305 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 COL9A2Q14055 689 aaPredicted RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 HKDC1Q2TB90 917 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 ATG9BQ674R7 924 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 LCN10Q6JVE6 187 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 VN1R4Q7Z5H5 301 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 ZSCAN1Q8NBB4 408 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 ZNF740Q8NDX6 193 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 PIWIL2Q8TC59 973 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 RILPQ96NA2 401 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 SPNS1Q9H2V7 528 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 DCDC2Q9UHG0 476 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 RUVBL1Q9Y265 456 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 TNPO3Q9Y5L0 923 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 TK2O00142 265 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 TERTO14746 1132 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 CASQ2O14958 399 aaPredicted RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 F8A1P23610 371 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 VARSP26640 1264 aaKnown RBP18.66■□□□□ 0.58
LSM4-203ENST00000593829 CXADRP78310 365 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 REEP5Q00765 189 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 VAC14Q08AM6 782 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 GARNL3Q5VVW2 1013 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 ACTRT2Q8TDY3 377 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 SLC45A3Q96JT2 553 aa18.66■□□□□ 0.58
LSM4-203ENST00000593829 GPR87Q9BY21 358 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms