RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PRSS44E7EML9 344 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CCL21O00585 134 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 GALR3O60755 368 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 WISP2O76076 250 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 STATHP02808 62 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 UQCRHP07919 91 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 SLC35G6P0C7Q6 338 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CTAGE8P0CG41 777 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CDH1P12830 882 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 AGAP20933 346 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CCR8P51685 355 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CDKN2DP55273 166 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 MEF2AQ02078 507 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 GUCY2DQ02846 1103 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 RBPJQ06330 500 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 TUBA3CQ13748 450 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 NSDHLQ15738 373 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 ZNF766Q5HY98 468 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 MFSD4BQ5TF39 518 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 TUBA3EQ6PEY2 450 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 TRMT10BQ6PF06 316 aaKnown RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 XKRXQ6PP77 449 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 LYPD4Q6UWN0 246 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 RPTNQ6XPR3 784 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 Q6ZPB1 254 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 MRGPRGQ86SM5 289 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CTAGE6Q86UF2 777 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CRLF3Q8IUI8 442 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CTAGE4Q8IX94 777 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 BEST3Q8N1M1 668 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 MYO1HQ8N1T3 1032 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 ZNF808Q8N4W9 903 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 NOA1Q8NC60 698 aaKnown RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 NT5CQ8TCD5 201 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 ELP5Q8TE02 316 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 FBXL8Q96CD0 374 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 LINGO1Q96FE5 620 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CCDC120Q96HB5 630 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 OR4K3Q96R72 315 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 LPAR4Q99677 370 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 NPAS2Q99743 824 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 UTP23Q9BRU9 249 aaKnown RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 TRIM54Q9BYV2 358 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 KCNK13Q9HB14 408 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 PLAC1Q9HBJ0 212 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 HCN3Q9P1Z3 774 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 SUCOQ9UBS9 1254 aaKnown RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CORO1CQ9ULV4 474 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-207ENST00000591519 VWA7Q9Y334 891 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 TEX264Q9Y6I9 313 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 ABCA12Q86UK0 2595 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 TRGV8A0A0C4DH27 118 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ESPNB1AK53 854 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 NDC80O14777 642 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 RDH16O75452 317 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 PIAS1O75925 651 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 TUBB4AP04350 444 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ENO2P09104 434 aaPredicted RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SMIM10L1P0DMW3 83 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ALOX12P18054 663 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 AHRP35869 848 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SLC26A5P58743 744 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SKP1P63208 163 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ACTN3Q08043 901 aaPredicted RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 USP10Q14694 798 aaKnown RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ABRAXAS2Q15018 415 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF630Q2M218 657 aaPredicted RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SFT2D3Q587I9 215 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 RBM20Q5T481 1227 aaKnown RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 TEDDM1Q5T9Z0 273 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 PAPD4Q6PIY7 484 aaKnown RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ZDHHC24Q6UX98 284 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 MBOAT1Q6ZNC8 495 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ARMC10Q8N2F6 343 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SLC5A8Q8N695 610 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 HORMAD2Q8N7B1 307 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF740Q8NDX6 193 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 MNS1Q8NEH6 495 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 FBXO25Q8TCJ0 367 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 PYROXD1Q8WU10 500 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ATL1Q8WXF7 558 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ANKRD7Q92527 254 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 TBC1D20Q96BZ9 403 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 MOCOSQ96EN8 888 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 CERS2Q96G23 380 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 PEX11GQ96HA9 241 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SMIM10Q96HG1 83 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 SIGLEC12Q96PQ1 595 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 UNKQ9C0B0 810 aaKnown RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 TRIM45Q9H8W5 580 aaPredicted RBP9.77□□□□□ -0.85
VPS4B-207ENST00000591519 CHST11Q9NPF2 352 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ARL15Q9NXU5 204 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ZFP69BQ9UJL9 534 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 PCNX1Q96RV3 2341 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 APCP25054 2843 aa9.77□□□□□ -0.85
VPS4B-207ENST00000591519 ARHGAP10A1A4S6 786 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 CHST10O43529 356 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 OR1F1O43749 312 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms