RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 SPATA9Q9BWV2 254 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 TRBV23OR9-2A0A075B6M9 112 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TARM1B6A8C7 271 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 BTN3A3O00478 584 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 DYRK3O43781 588 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 MMP20O60882 483 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ACRP10323 421 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ETFAP13804 333 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ITIH1P19827 911 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC9A5Q14940 896 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF181Q2M3W8 571 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 KIAA1161Q6NSJ0 714 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 IZUMO1Q8IYV9 350 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TCEANCQ8N8B7 351 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 SRFBP1Q8NEF9 429 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 BARD1Q99728 777 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 NTMT1Q9BV86 223 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 DSN1Q9H410 356 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TAS2R9Q9NYW1 312 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 CCRL2O00421 344 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ALPPP05187 535 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 PSKH1P11801 424 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 CKMT1AP12532 417 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 GPR149Q86SP6 731 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 GPR26Q8NDV2 337 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 SH3YL1Q96HL8 342 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 SLCO3A1Q9UIG8 710 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 MTHFD2P13995 350 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 HSD3B1P14060 373 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 CD1EP15812 388 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 HSD3B2P26439 372 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 EMX1Q04741 257 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TEAD2Q15562 447 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF691Q5VV52 312 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF517Q6ZMY9 492 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 PLEKHG7Q6ZR37 379 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 FATE1Q969F0 183 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TP53INP1Q96A56 240 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 OR5F1O95221 314 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 IL3P08700 152 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 RELAQ04206 551 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 FAM124AQ86V42 546 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 PTRH1Q86Y79 214 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TDP1Q9NUW8 608 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 C14orf119Q9NWQ9 140 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TMEM98Q9Y2Y6 226 aa16.49■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SMIM30A4D0T7 59 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 PFKLP17858 780 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SPINT3P49223 89 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC13A2Q13183 592 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 KEAP1Q14145 624 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 LY6G5CQ5SRR4 150 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 C10orf62Q5T681 223 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TRAM1L1Q8N609 369 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 DNASE1L2Q92874 299 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF583Q96ND8 569 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TRPV5Q9NQA5 729 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 CALML5Q9NZT1 146 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 ABCG2Q9UNQ0 655 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 BACE2Q9Y5Z0 518 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 LY75O60449 1722 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 LATS1O95835 1130 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 ATF6P18850 670 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 UQCRC2P22695 453 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC22A15Q8IZD6 547 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC5A8Q8N695 610 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 ZFP90Q8TF47 636 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SMG7Q92540 1137 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 NCSTNQ92542 709 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TRNT1Q96Q11 434 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 CITED4Q96RK1 184 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 OCEL1Q9H607 264 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 MRPS30Q9NP92 439 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 HCSTQ9UBK5 93 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 UTS2RQ9UKP6 389 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 RB1P06400 928 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 LAMP2P13473 410 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 CMPK1P30085 196 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 CCT3P49368 545 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TBPL1P62380 186 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TLE2Q04725 743 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 PAPD5Q8NDF8 572 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 GLYATL1Q969I3 302 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 SCRN2Q96FV2 425 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 RDH14Q9HBH5 336 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 NEUROD4Q9HD90 331 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 TAS2R7Q9NYW3 318 aa16.48■□□□□ 0.23
SMARCA4-215ENST00000590574 FBXO10Q9UK96 956 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms