RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CHST11Q9NPF2 352 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 IKZF3Q9UKT9 509 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 SLC22A14Q9Y267 594 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 TACC2O95359 2948 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 PKDREJQ9NTG1 2253 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 ASPDHA6ND91 283 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 NPIPA5E9PKD4 350 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 CDC7O00311 574 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 NEURL1O76050 574 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF37AP17032 561 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 HTR1EP28566 365 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 GRNP28799 593 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 HNMTP50135 292 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 ITGA8P53708 1063 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 BTG2P78543 158 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 MGAT5Q09328 741 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 PPP1R3AQ16821 1122 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 XKRXQ6PP77 449 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 BNC2Q6ZN30 1099 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 FRA10AC1Q70Z53 315 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 ANKMY2Q8IV38 441 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 KIF2BQ8N4N8 673 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 ANKRD53Q8N9V6 530 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 PRDM9Q9NQV7 894 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 NPIPA1Q9UND3 350 aa16.82■□□□□ 0.28
PRKCSH-211ENST00000590098 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 SAGE2PA6NJ88 616 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 H2AFYO75367 372 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 SLC25A12O75746 678 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 SERPINA6P08185 405 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 MAOAP21397 527 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 TPP2P29144 1249 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 CYB561P49447 251 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 SMSP52788 366 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 CDKL1Q00532 357 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 C3AR1Q16581 482 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 TOR1AIP1Q5JTV8 583 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 ZC3HC1Q86WB0 502 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 SPPL2CQ8IUH8 684 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 VPS39Q96JC1 886 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 FAR2Q96K12 515 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 FRMD6Q96NE9 622 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 WDR83Q9BRX9 315 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 KLHL31Q9H511 634 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 CTNNAL1Q9UBT7 734 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 TINAGQ9UJW2 476 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 OARD1Q9Y530 152 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 PSAT1Q9Y617 370 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 DCHS2Q6V1P9 2916 aa16.81■□□□□ 0.28
PRKCSH-211ENST00000590098 FAM95CA0A1B0GW59 222 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 TCRBV16S1A1N1A0A5B0 115 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 FCHO1O14526 889 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 SMIM10L1P0DMW3 83 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 GNAZP19086 355 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 STXBP1P61764 594 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 HYAL2Q12891 473 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 PDIA2Q13087 525 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF460Q14592 562 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF630Q2M218 657 aaPredicted RBP16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 ADAMTSL2Q86TH1 951 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 TMEM125Q96AQ2 219 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 SMIM10Q96HG1 83 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 TRIM51Q9BSJ1 452 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 DEFB126Q9BYW3 111 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 TRIM31Q9BZY9 425 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 NSMCE4AQ9NXX6 385 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF835Q9Y2P0 537 aa16.8■□□□□ 0.28
PRKCSH-211ENST00000590098 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 A8MUA0 341 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 ASNA1O43681 348 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 NME2P1O60361 137 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 WDR47O94967 919 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 SEC31AO94979 1220 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 C1GALT1C1LP0DN25 315 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 COX6B1P14854 86 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 ABOP16442 354 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF24P17028 368 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 NME2P22392 152 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 SLC12A2P55011 1212 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 MLF1P58340 268 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 TAS2R39P59534 338 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 BTN3A2P78410 334 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF468Q5VIY5 522 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 Q6ZPB1 254 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 CTAGE6Q86UF2 777 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 CA13Q8N1Q1 262 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 GHDCQ8N2G8 530 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 FBXO36Q8NEA4 188 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 TTLQ8NG68 377 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 CREB3L4Q8TEY5 395 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 GPAMQ9HCL2 828 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 NECTIN3Q9NQS3 549 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 MMACHCQ9Y4U1 282 aa16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 NCOA6Q14686 2063 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-211ENST00000590098 IGKV3D-11A0A0A0MRZ8 115 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 AGAP20933 346 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 TRHRP34981 398 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 PTGER4P35408 488 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms