RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 IL1RNP18510 177 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ZNF10P21506 573 aaPredicted RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ALAS2P22557 587 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 PRPH2P23942 346 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 SEC24CP53992 1094 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 SNRPNP63162 240 aaKnown RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 TBL3Q12788 808 aaKnown RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 COL9A2Q14055 689 aaPredicted RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 AP5B1Q2VPB7 878 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 DEFB134Q4QY38 66 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 VWA5B1Q5TIE3 1220 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 RHBDD2Q6NTF9 364 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 MAVSQ7Z434 540 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 UBE3DQ7Z6J8 389 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 METTL4Q8N3J2 472 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 TUBGCP3Q96CW5 907 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 CLIP3Q96DZ5 547 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 THOC1Q96FV9 657 aaKnown RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 PPP3R2Q96LZ3 170 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 SIKE1Q9BRV8 207 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 TBCDQ9BTW9 1192 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 TRIM55Q9BYV6 548 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ULBP3Q9BZM4 244 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 B3GNT4Q9C0J1 378 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ROGDIQ9GZN7 287 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 NRSN2Q9GZP1 204 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 COPS7BQ9H9Q2 264 aaPredicted RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 NPHS2Q9NP85 383 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 PRDM7Q9NQW5 492 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 TXLNGQ9NUQ3 528 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 DHCR7Q9UBM7 475 aaKnown RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 NDOR1Q9UHB4 597 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 KLK13Q9UKR3 277 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 KIF26BQ2KJY2 2108 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 A0A0A6YYC8 382 aaPredicted RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 A0A1B0GX78 115 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 GMNCA6NCL1 334 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 I3L1I5 382 aaPredicted RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SDHDO14521 159 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 LSM1O15116 133 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 FOXS1O43638 330 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 GALR3O60755 368 aaPredicted RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 PEX11AO75192 247 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 VPS4BO75351 444 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SEC22BO75396 215 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 KIAA0754O94854 1291 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 KLHL18O94889 574 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 B3GALT4O96024 378 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 ZNF28P17035 718 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 RBMS1P29558 406 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SSR2P43308 183 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 TSFMP43897 325 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 AVPR1BP47901 424 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 AQP5P55064 265 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SKP1P63208 163 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 BTN3A2P78410 334 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 ACSM2AQ08AH3 577 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 CAMK2BQ13554 666 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 GALNTL6Q49A17 601 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 ATP6AP1LQ52LC2 224 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SPIN4Q56A73 249 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 ACSM2BQ68CK6 577 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 OR4C11Q6IEV9 310 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 CGB2Q6NT52 195 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 NIPAL1Q6NVV3 410 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 EPGNQ6UW88 154 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 PRSS41Q7RTY9 318 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 NUDT13Q86X67 352 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 C1orf52Q8N6N3 182 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 OR9A4Q8NGU2 314 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 PROKR1Q8TCW9 393 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 CHTF18Q8WVB6 975 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 RNF31Q96EP0 1072 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 MVB12AQ96EY5 273 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 APIPQ96GX9 242 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 METTL2AQ96IZ6 378 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SLC46A1Q96NT5 459 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 SORBS1Q9BX66 1292 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 NSRP1Q9H0G5 558 aaKnown RBP14.41□□□□□ -0.1
ATG4D-211ENST00000589753 LRTM1Q9HBL6 345 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 C1orf109Q9NX04 203 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 CDC14AQ9UNH5 594 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 NAALAD2Q9Y3Q0 740 aa14.41□□□□□ -0.1
ATG4D-211ENST00000589753 GOLGA8QA0A0J9YX86 632 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 GOLGA8OA6NCC3 632 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 GOLGA8NF8WBI6 632 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 NVLO15381 856 aaKnown RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 DIAPH2O60879 1101 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 STK17BO94768 372 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 NSA2O95478 260 aaKnown RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 HIST1H1TP22492 207 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 EPHA3P29320 983 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 BSGP35613 385 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 MTTPP55157 894 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 SLC9B1Q4ZJI4 515 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 C1orf189Q5VU69 101 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 PRMT9Q6P2P2 845 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 IGF2-ASQ6U949 168 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 PAGE2Q7Z2X7 111 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 COMMD6Q7Z4G1 85 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms