RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DHRSXQ8N5I4 330 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 FAM47BQ8NA70 645 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 C11orf65Q8NCR3 313 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 OR2A1Q8NGT9 310 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 OR5K1Q8NHB7 308 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 RPLP0P6Q8NHW5 317 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 NETO1Q8TDF5 533 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 OR5P2Q8WZ92 322 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 TM4SF18Q96CE8 201 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 ERLEC1Q96DZ1 483 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 THAP11Q96EK4 314 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 AURKBQ96GD4 344 aaPredicted RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 VPS50Q96JG6 964 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 BMFQ96LC9 184 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 CNBD2Q96M20 576 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 PRAP1Q96NZ9 151 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 RBM4BQ9BQ04 359 aaKnown RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 ADI1Q9BV57 179 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 RBM4Q9BWF3 364 aaKnown RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 FAIM2Q9BWQ8 316 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 TMEM38AQ9H6F2 299 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 DDX31Q9H8H2 851 aaKnown RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 NEUROD4Q9HD90 331 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 MIEF1Q9NQG6 463 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 ZSCAN32Q9NX65 697 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 THUMPD1Q9NXG2 353 aaKnown RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 TUBA8Q9NY65 449 aaPredicted RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 USE1Q9NZ43 259 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 EHD3Q9NZN3 535 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 USP36Q9P275 1121 aaKnown RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 ANKMY1Q9P2S6 941 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 FAF1Q9UNN5 650 aaPredicted RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 USP22Q9UPT9 525 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 KCNK6Q9Y257 313 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 BTBD3Q9Y2F9 522 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 CFAP20Q9Y6A4 193 aaKnown RBP9.94□□□□□ -0.82
VPS25-203ENST00000589520 DGKBQ9Y6T7 804 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 TRPM6Q9BX84 2022 aa9.94□□□□□ -0.82
VPS25-203ENST00000589520 A0A1W2PRB8 838 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 TCRBV21S2A2A0A5A6 115 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 FAM149AA5PLN7 773 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 FAM221BA6H8Z2 402 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 G3V2T6 193 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 MBTPS2O43462 519 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 SEMA4FO95754 770 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 TNFP01375 233 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 SRFP11831 508 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 GABRG2P18507 467 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 CAPGP40121 348 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 SH3BGRP55822 239 aaPredicted RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 PPP2CBP62714 309 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 PPP2CAP67775 309 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 TUBA4AP68366 448 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 DAG1Q14118 895 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 LRRC32Q14392 662 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 GK3PQ14409 553 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 KIR2DS3Q14952 304 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 ZIC1Q15915 447 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 ZNF630Q2M218 657 aaPredicted RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 OR4C11Q6IEV9 310 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 PIWIL3Q7Z3Z3 882 aaKnown RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 PATL1Q86TB9 770 aaKnown RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 AMIGO1Q86WK6 493 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 DCP2Q8IU60 420 aaKnown RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 CLECL1Q8IZS7 167 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 METTL25Q8N6Q8 603 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 ANKRD53Q8N9V6 530 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 LMNTD1Q8N9Z9 388 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 LINC01555Q8NAE3 123 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 MFSD9Q8NBP5 474 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 ZNF740Q8NDX6 193 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 WDR48Q8TAF3 677 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 FBXO30Q8TB52 745 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 LZICQ8WZA0 190 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 TMBIM1Q969X1 311 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 MYCBPQ99417 103 aaPredicted RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 GAS2L1Q99501 681 aaPredicted RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 ACAT2Q9BWD1 397 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 NLNQ9BYT8 704 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 ROGDIQ9GZN7 287 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 SPNS1Q9H2V7 528 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 EPB41L1Q9H4G0 881 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 NTN4Q9HB63 628 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 FGF22Q9HCT0 170 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 TM9SF3Q9HD45 589 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 IL1RAPQ9NPH3 570 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 PRDM8Q9NQV8 689 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 SLC6A13Q9NSD5 602 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 ACSS1Q9NUB1 689 aaPredicted RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 ADPRHL2Q9NX46 363 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 UBAP1Q9NZ09 502 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 EXO1Q9UQ84 846 aaKnown RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 MYRFQ9Y2G1 1151 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 MRPS17Q9Y2R5 130 aaKnown RBP9.93□□□□□ -0.82
VPS25-203ENST00000589520 ZNF451Q9Y4E5 1061 aa9.93□□□□□ -0.82
VPS25-203ENST00000589520 LRIT2A6NDA9 550 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 POM121BA6NF01 834 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 URADA6NGE7 173 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 PLPP1O14494 284 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms