RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 ERCC6LQ2NKX8 1250 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 PLEKHN1Q494U1 663 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-209ENST00000589214 DEFB134Q4QY38 66 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 ADNP2Q6IQ32 1131 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 TMIGD1Q6UXZ0 262 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 LINC00696Q6ZRV3 163 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 LANCL3Q6ZV70 420 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 LRRC70Q7Z2Q7 622 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 KBTBD2Q8IY47 623 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERCC1-209ENST00000589214 IQCKQ8N0W5 287 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 OR5T3Q8NGG3 340 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 NT5CQ8TCD5 201 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 METTL21AQ8WXB1 218 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 CCT6BQ92526 530 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 PHF21BQ96EK2 531 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 PEX11GQ96HA9 241 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 CNDP1Q96KN2 507 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 AICDAQ9GZX7 198 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 PSMC3IPQ9P2W1 217 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-209ENST00000589214 OPTCQ9UBM4 332 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 ZNF490Q9ULM2 529 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-209ENST00000589214 VPS4AQ9UN37 437 aa14.36□□□□□ -0.11
ERCC1-209ENST00000589214 PRRC2CQ9Y520 2896 aaKnown RBP14.36□□□□□ -0.11
ERCC1-209ENST00000589214 LOC102723996A0A087X1L8 192 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 IGHV3-20A0A0C4DH32 117 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 IQANK1A0A1B0GTG1 560 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 A0A1W2PQ72 361 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 OR2W5A6NFC9 320 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 PCDH17O14917 1159 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 GALR3O60755 368 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-209ENST00000589214 CDC123O75794 336 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-209ENST00000589214 RBP1P09455 135 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 PRR35P0CG20 571 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 COL6A2P12110 1019 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 ALOX12P18054 663 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 GNLYP22749 145 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 HSD17B3P37058 310 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 ALDH18A1P54886 795 aaKnown RBP14.35□□□□□ -0.11
ERCC1-209ENST00000589214 IRF8Q02556 426 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 HYAL2Q12891 473 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 SETDB1Q15047 1291 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 TOR1AIP1Q5JTV8 583 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 TMEM205Q6UW68 189 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 TIFABQ6ZNK6 161 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 Q6ZS92 163 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 ABHD13Q7L211 337 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 CUZD1Q86UP6 607 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 CYP4X1Q8N118 509 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 KRT78Q8N1N4 520 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 AFAP1L2Q8N4X5 818 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 AMER2Q8N7J2 671 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 PTGR2Q8N8N7 351 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-209ENST00000589214 BRIX1Q8TDN6 353 aaKnown RBP14.35□□□□□ -0.11
ERCC1-209ENST00000589214 CREB3L4Q8TEY5 395 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 PPP4R1Q8TF05 950 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 UBTD2Q8WUN7 234 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 MTBPQ96DY7 904 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 PTGFRNQ9P2B2 879 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 XPR1Q9UBH6 696 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 ANGPTL3Q9Y5C1 460 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 MYO18BQ8IUG5 2567 aa14.35□□□□□ -0.11
ERCC1-209ENST00000589214 A0A0G2JN53 185 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 C4orf51C9J302 202 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 KLK8O60259 260 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SERPINA7P05543 415 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SBK3P0C264 359 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 PYGBP11216 843 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 EPB42P16452 691 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SKP1P63208 163 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 MFAP5Q13361 173 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 NAA30Q147X3 362 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 TSNAXIP1Q2TAA8 658 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 IGFL2Q6UWQ7 119 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 ISLR2Q6UXK2 745 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 VN1R5Q7Z5H4 357 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SIRT6Q8N6T7 355 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 GALNT11Q8NCW6 608 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 TRPV3Q8NET8 790 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 OR2W6PQ8NHA6 318 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 EPS8L3Q8TE67 593 aaKnown RBP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 UTP15Q8TED0 518 aaKnown RBP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 MZB1Q8WU39 189 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 PTCD3Q96EY7 689 aaKnown RBP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SLC29A3Q9BZD2 475 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SLC6A16Q9GZN6 736 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 PRM3Q9NNZ6 103 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 TMEM216Q9P0N5 145 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-209ENST00000589214 FETUBQ9UGM5 382 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 PCDHGA10Q9Y5H3 936 aa14.34□□□□□ -0.11
ERCC1-209ENST00000589214 SHANK1Q9Y566 2161 aa14.33□□□□□ -0.11
ERCC1-209ENST00000589214 CCDC189A1A4V9 331 aa14.33□□□□□ -0.12
ERCC1-209ENST00000589214 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.12
ERCC1-209ENST00000589214 SMIM24O75264 130 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms