RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NATD1Q8N6N6 113 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CELF5Q8N6W0 485 aaKnown RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 OR4A15Q8NGL6 344 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 FNDC8Q8TC99 324 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 IPCEF1Q8WWN9 437 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PMM1Q92871 262 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SH3KBP1Q96B97 665 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 VWCEQ96DN2 955 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 MTERF3Q96E29 417 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TCEAL4Q96EI5 215 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 C11orf24Q96F05 449 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TPD52L3Q96J77 140 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 DOHHQ9BU89 302 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 REEP4Q9H6H4 257 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SIRT5Q9NXA8 310 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TMEFF2Q9UIK5 374 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 MBD1Q9UIS9 605 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 GPR34Q9UPC5 381 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 RWDD3Q9Y3V2 267 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 hCG_2039718K7EN88 272 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 KIAA0355O15063 1070 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SLC22A1O15245 554 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 VEGFDO43915 354 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PRAMEF4O60810 478 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CBFA2T3O75081 653 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 NDUFS2O75306 463 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CLPXO76031 633 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 C1orf105O95561 183 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 KRT75O95678 551 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 FGBP02675 491 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 RPN2P04844 631 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ADH5P11766 374 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CD22P20273 847 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 MATN1P21941 496 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PBLDP30039 288 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PCGF2P35227 344 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PIK3CBP42338 1070 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CRATP43155 626 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 GPR1P46091 355 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 STT3AP46977 705 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ENTPD1P49961 510 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ITGA1P56199 1179 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 WNT3P56703 355 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 HTRA4P83105 476 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 RPL6Q02878 288 aaKnown RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 FADDQ13158 208 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TSTA3Q13630 321 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SIM2Q14190 667 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 RGNQ15493 299 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 RPS26P11Q5JNZ5 115 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 YOD1Q5VVQ6 348 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PRAMEF9Q5VWM5 478 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TMEM215Q68D42 235 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 GTF2IRD2BQ6EKJ0 949 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SLCO4C1Q6ZQN7 724 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TRMT11Q7Z4G4 463 aaKnown RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 GALNT5Q7Z7M9 940 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TMEM179BQ7Z7N9 219 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 DSG4Q86SJ6 1040 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TMPRSS11BQ86T26 416 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 GTF2IRD2Q86UP8 949 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ANKRD13BQ86YJ7 626 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 P3H2Q8IVL5 708 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 KRT78Q8N1N4 520 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF540Q8NDQ6 660 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TMIEQ8NEW7 156 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 OR9A1PQ8NGU1 263 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 FBLIM1Q8WUP2 373 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 OR8D1Q8WZ84 308 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 MUL1Q969V5 352 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 DTD2Q96FN9 168 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 MRGPRX3Q96LB0 322 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 DGCR6LQ9BY27 220 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 DPEP2Q9H4A9 486 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 C11orf49Q9H6J7 331 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF556Q9HAH1 456 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TRIM39Q9HCM9 518 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 IL23AQ9NPF7 189 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TBCCD1Q9NVR7 557 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SPASTQ9UBP0 616 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 FBXO10Q9UK96 956 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 UTS2RQ9UKP6 389 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PADI2Q9Y2J8 665 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SLC27A6Q9Y2P4 619 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 WNT6Q9Y6F9 365 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 OBSL1O75147 1896 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 A0A0J9YVX5 310 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 TMEM202A6NGA9 273 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 M0R3G1 203 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RFPL2O75678 378 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NTRK1P04629 796 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 IDSP22304 550 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CXCR2P25025 360 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 BMPR1AP36894 532 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 POLR2IP36954 125 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 HSD17B2P37059 387 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 DAPP51397 102 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 GALK1P51570 392 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CTSCP53634 463 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms