RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TMEM132DQ14C87 1099 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 RPS6KA1Q15418 735 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 AARDQ4LEZ3 155 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ADAMTSL4-AS1Q5T5F5 129 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 WLSQ5T9L3 541 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ZC2HC1BQ5TFG8 222 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 PWWP2BQ6NUJ5 590 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ZNF497Q6ZNH5 498 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 C15orf52Q6ZUT6 534 aaKnown RBP2.99□□□□□ -1.93
SMAD4-207ENST00000589076 NOTCH2NLQ7Z3S9 236 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 CCDC185Q8N715 623 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 TCEANCQ8N8B7 351 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 LPCAT1Q8NF37 534 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 SMAP2Q8WU79 429 aaPredicted RBP2.99□□□□□ -1.93
SMAD4-207ENST00000589076 KRT35Q92764 455 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 BCL2L2Q92843 193 aaPredicted RBP2.99□□□□□ -1.93
SMAD4-207ENST00000589076 CASP10Q92851 521 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 OMA1Q96E52 524 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 CABS1Q96KC9 395 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 LURAP1Q96LR2 239 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 KRT12Q99456 494 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ASCL2Q99929 193 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ZNF559Q9BR84 538 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 PIGQQ9BRB3 760 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 CLEC7AQ9BXN2 247 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 NAPBQ9H115 298 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 DPEP2Q9H4A9 486 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 FGF22Q9HCT0 170 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 PNPLA3Q9NST1 481 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 TMOD3Q9NYL9 352 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 POLKQ9UBT6 870 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 SATB2Q9UPW6 733 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ZNF510Q9Y2H8 683 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 PYGO1Q9Y3Y4 419 aa2.99□□□□□ -1.93
SMAD4-207ENST00000589076 ABCC9O60706 1549 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 RP1L1Q8IWN7 2480 aaPredicted RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 SMIM30A4D0T7 59 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 ZNF195O14628 629 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 CLN5O75503 358 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 CEACAM4O75871 244 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 SRD5A2P31213 254 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 TSFMP43897 325 aaKnown RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 SERPINH1P50454 418 aaKnown RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 CLCN4P51793 760 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 XGP55808 180 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 NME5P56597 212 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 ARF5P84085 180 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 GUCY2DQ02846 1103 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 SLC3A1Q07837 685 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 ACTN3Q08043 901 aaPredicted RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 RPA4Q13156 261 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 STXBP2Q15833 593 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 ACKR1Q16570 336 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 HLA-BQ31612 363 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 FAM106AQ4KMX7 169 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 KCTD11Q693B1 232 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 TCEAL6Q6IPX3 200 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 SLC27A4Q6P1M0 643 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 BHLHB9Q6PI77 547 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 Q6ZSR9 355 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 CHMP1BQ7LBR1 199 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 TRMT11Q7Z4G4 463 aaKnown RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 C5orf24Q7Z6I8 188 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 TDHQ8IZJ6 230 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 ZNF444Q8N0Y2 327 aaPredicted RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 NAT8LQ8N9F0 302 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 RNF149Q8NC42 400 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 MAPK1IP1LQ8NDC0 245 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 CHURC1Q8WUH1 139 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 SNX21Q969T3 373 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 CFAP36Q96G28 342 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 C5orf30Q96GV9 206 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 NEDD4LQ96PU5 975 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 OSBPL8Q9BZF1 889 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 VIPAS39Q9H9C1 493 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 MAGEF1Q9HAY2 307 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 PLCXD1Q9NUJ7 323 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 MAD2L2Q9UI95 211 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 POMT2Q9UKY4 750 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 MRPS28Q9Y2Q9 187 aaKnown RBP2.98□□□□□ -1.93
SMAD4-207ENST00000589076 KNSTRNQ9Y448 316 aa2.98□□□□□ -1.93
SMAD4-207ENST00000589076 RNF123Q5XPI4 1314 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 A0A087WZ39 114 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 A0A0A6YYC8 382 aaPredicted RBP2.97□□□□□ -1.93
SMAD4-207ENST00000589076 A0A1W2PR80 420 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 ZNF732B4DXR9 585 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 I3L1I5 382 aaPredicted RBP2.97□□□□□ -1.93
SMAD4-207ENST00000589076 DDX39AO00148 427 aaKnown RBP2.97□□□□□ -1.93
SMAD4-207ENST00000589076 MAGEC1O60732 1142 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 KERAO60938 352 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 NXPH2O95156 264 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 CPA3P15088 417 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 CTNNA2P26232 953 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 SLC1A3P43003 542 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 CYCSP99999 105 aaKnown RBP2.97□□□□□ -1.93
SMAD4-207ENST00000589076 UBXN1Q04323 297 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 NPRL3Q12980 569 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 PPP2R5CQ13362 524 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 ATP1A1-AS1Q5TC04 95 aa2.97□□□□□ -1.93
SMAD4-207ENST00000589076 PRAMEF8Q5VWM4 474 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms