RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 HYAL2Q12891 473 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 INAVAQ3KP66 663 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 OR4C11Q6IEV9 310 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 TRIM40Q6P9F5 258 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 USP53Q70EK8 1073 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 CARFQ8N187 725 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 KIF2BQ8N4N8 673 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 OR2L5Q8NG80 312 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 STARD8Q92502 1023 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 TM4SF19Q96DZ7 209 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 KCNC2Q96PR1 638 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 NPAS2Q99743 824 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 C17orf62Q9BQA9 187 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 SORBS1Q9BX66 1292 aaKnown RBP21.22■□□□□ 0.99
ATG4D-209ENST00000588857 SLC6A16Q9GZN6 736 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 KLHL31Q9H511 634 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 CLMPQ9H6B4 373 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 KLHL3Q9UH77 587 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 ADAM29Q9UKF5 820 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 CDV3Q9UKY7 258 aaKnown RBP21.22■□□□□ 0.99
ATG4D-209ENST00000588857 MAPRE3Q9UPY8 281 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 U3KQA8 63 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 SPTBN4Q9H254 2564 aa21.22■□□□□ 0.99
ATG4D-209ENST00000588857 LOC105369274A0A096LPK9 316 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 LOC102723532A0A0G2JNH3 316 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 A0A1W2PP18 115 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 LNP1A1A4G5 178 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 RTCAO00442 366 aaKnown RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 FBP2O00757 339 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 ERI3O43414 337 aaKnown RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 DNAJC8O75937 253 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 IL6P05231 212 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 BSGP35613 385 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 SSR2P43308 183 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 DUSP3P51452 185 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 ARFIP1P53367 373 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 DAB2P98082 770 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 PUM1Q14671 1186 aaKnown RBP eCLIP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 DNAL1Q4LDG9 190 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 TIGD2Q4W5G0 525 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 REP15Q6BDI9 236 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 FRMPD2BQ6IN97 320 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 WDR74Q6RFH5 385 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 UBE3DQ7Z6J8 389 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 OR4N4Q8N0Y3 316 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 PCYOX1LQ8NBM8 494 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 GFM2Q969S9 779 aaKnown RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 VPS33AQ96AX1 596 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 TMEM74Q96NL1 305 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 ZNF717Q9BY31 904 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-209ENST00000588857 SOHLH2Q9NX45 425 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 NDE1Q9NXR1 346 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 PCDHGB2Q9Y5G2 931 aa21.21■□□□□ 0.99
ATG4D-209ENST00000588857 URADA6NGE7 173 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 MRASO14807 208 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 CFLARO15519 480 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 AKAP10O43572 662 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 EEDO75530 441 aaKnown RBP21.2■□□□□ 0.98
ATG4D-209ENST00000588857 EIF2S1P05198 315 aaKnown RBP21.2■□□□□ 0.98
ATG4D-209ENST00000588857 TPP2P29144 1249 aaPredicted RBP21.2■□□□□ 0.98
ATG4D-209ENST00000588857 MAPK12P53778 367 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 SLC25A3Q00325 362 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 HKDC1Q2TB90 917 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 FAM174BQ3ZCQ3 159 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 RIPOR1Q6ZS17 1223 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 TMEM132CQ8N3T6 1108 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 TBCDQ9BTW9 1192 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 NLNQ9BYT8 704 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 AICDAQ9GZX7 198 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 FAM60AQ9NP50 221 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 DNAAF2Q9NVR5 837 aaKnown RBP21.2■□□□□ 0.98
ATG4D-209ENST00000588857 CROCCQ5TZA2 2017 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 DCHS1Q96JQ0 3298 aa21.2■□□□□ 0.98
ATG4D-209ENST00000588857 IGHV5-51A0A0C4DH38 117 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 ZBTB11O95625 1053 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 C9P02748 559 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CKMT1AP12532 417 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CPOXP36551 454 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 HPCAL1P37235 193 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 MLLT3P42568 568 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 DGKQP52824 942 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 PROX2Q3B8N5 592 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 COQ5Q5HYK3 327 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 MANEAQ5SRI9 462 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 PERM1Q5SV97 790 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 ABHD17CQ6PCB6 329 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 C16orf89Q6UX73 402 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 MCATQ8IVS2 390 aaKnown RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 RIMKLAQ8IXN7 391 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 KCT2Q8NC54 265 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 C16orf78Q8WTQ4 265 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 NUDT8Q8WV74 236 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 GAL3ST3Q96A11 431 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 MCUR1Q96AQ8 359 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 TESCQ96BS2 214 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 DDX31Q9H8H2 851 aaKnown RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 PDE7BQ9NP56 450 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 MYNNQ9NPC7 610 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 SLC52A3Q9NQ40 469 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 LHX9Q9NQ69 397 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms