RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 KIAA0408Q6ZU52 694 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 CYP4X1Q8N118 509 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 EID3Q8N140 333 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 MYO1HQ8N1T3 1032 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 RASGEF1CQ8N431 466 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
SDF2-202ENST00000585428 APCDD1LQ8NCL9 501 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 MAGOHBQ96A72 148 aaKnown RBP13.53□□□□□ -0.24
SDF2-202ENST00000585428 TMEM125Q96AQ2 219 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 FAM167BQ9BTA0 163 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 SPNS1Q9H2V7 528 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 F8P00451 2351 aa13.52□□□□□ -0.24
SDF2-202ENST00000585428 CTAGE15A4D2H0 777 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 SAGE2PA6NJ88 616 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 KLRC4-KLRK1H3BQV0 150 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 MAOAP21397 527 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 PTGS2P35354 604 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 AP1S2P56377 157 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 SKP1P63208 163 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 CSHL1Q14406 222 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 CYP1B1Q16678 543 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 CMPK2Q5EBM0 449 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 MEX3BQ6ZN04 569 aaKnown RBP13.52□□□□□ -0.25
SDF2-202ENST00000585428 ABHD13Q7L211 337 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 CTAGE6Q86UF2 777 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 ANKRD53Q8N9V6 530 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 ZFP62Q8NB50 900 aaPredicted RBP13.52□□□□□ -0.25
SDF2-202ENST00000585428 LILRB4Q8NHJ6 448 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 CHTF18Q8WVB6 975 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 NEIL2Q969S2 332 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 FBXL8Q96CD0 374 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 ARL15Q9NXU5 204 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 COQ3Q9NZJ6 369 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 ZFATQ9P243 1243 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 PPIEQ9UNP9 301 aaKnown RBP13.52□□□□□ -0.25
SDF2-202ENST00000585428 KLF13Q9Y2Y9 288 aaPredicted RBP13.52□□□□□ -0.25
SDF2-202ENST00000585428 SCN3AQ9NY46 2000 aa13.52□□□□□ -0.25
SDF2-202ENST00000585428 PCNX1Q96RV3 2341 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 FCHO1O14526 889 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 PEX1O43933 1283 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 TFEBP19484 476 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 MEOX1P50221 254 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 GPR143P51810 404 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 IL2P60568 153 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 TFF3Q07654 80 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 RGS1Q08116 209 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
SDF2-202ENST00000585428 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 MDGA2Q7Z553 956 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 CDH24Q86UP0 819 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 CNTN4Q8IWV2 1026 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 TBC1D19Q8N5T2 526 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 TRPV3Q8NET8 790 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 LINGO1Q96FE5 620 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
SDF2-202ENST00000585428 DEFB126Q9BYW3 111 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 KLHL31Q9H511 634 aa13.51□□□□□ -0.25
SDF2-202ENST00000585428 A8MUA0 341 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 HS6ST1O60243 411 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 KRT38O76015 456 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 TOXO94900 526 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 SERPIND1P05546 499 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 RNH1P13489 461 aaKnown RBP13.5□□□□□ -0.25
SDF2-202ENST00000585428 RFC3P40938 356 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 PGGT1BP53609 377 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 RAB8AP61006 207 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 EMC4Q5J8M3 183 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 CCDC137Q6PK04 289 aaKnown RBP13.5□□□□□ -0.25
SDF2-202ENST00000585428 CEP128Q6ZU80 1094 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 GALNT7Q86SF2 657 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 B3GNT7Q8NFL0 401 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 OR52N2Q8NGI0 321 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 CREB3L4Q8TEY5 395 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 ASB5Q8WWX0 329 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 SLC5A11Q8WWX8 675 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 ATL1Q8WXF7 558 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 MS4A14Q96JA4 679 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 TRIM54Q9BYV2 358 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 AICDAQ9GZX7 198 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 TNFRSF10DQ9UBN6 386 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 ZNF223Q9UK11 482 aaPredicted RBP13.5□□□□□ -0.25
SDF2-202ENST00000585428 VWA7Q9Y334 891 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 CLDN16Q9Y5I7 305 aa13.5□□□□□ -0.25
SDF2-202ENST00000585428 URADA6NGE7 173 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 TMEM200CA6NKL6 621 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 C4orf51C9J302 202 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 TFECO14948 347 aaPredicted RBP13.49□□□□□ -0.25
SDF2-202ENST00000585428 FANCGO15287 622 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 TTC4O95801 387 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 TPOP07202 933 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 SERPINA6P08185 405 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 CCDC175P0C221 793 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 PGAM1P18669 254 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms