RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 UBTD2Q8WUN7 234 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 CNDP1Q96KN2 507 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 CD244Q9BZW8 370 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 PITHD1Q9GZP4 211 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-221ENST00000584888 VN1R1Q9GZP7 353 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 ZNF700Q9H0M5 742 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 KLHL31Q9H511 634 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 HCN3Q9P1Z3 774 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 MKL2Q9ULH7 1088 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 NFU1Q9UMS0 254 aa16.83■□□□□ 0.28
ERBB2-221ENST00000584888 A0A096LPK6 155 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 IGHV1-45A0A0A0MS14 117 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 NSG1A0A0A6YYJ2 146 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 UBXN8O00124 270 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 RDH16O75452 317 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 KLHL2O95198 593 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 CXCR2P25025 360 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 XCR1P46094 333 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 RGS1Q08116 209 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 SLBPQ14493 270 aaKnown RBP eCLIP16.82■□□□□ 0.28
ERBB2-221ENST00000584888 ACAP2Q15057 778 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 RBBP5Q15291 538 aaKnown RBP16.82■□□□□ 0.28
ERBB2-221ENST00000584888 B3GNTL1Q67FW5 361 aaPredicted RBP16.82■□□□□ 0.28
ERBB2-221ENST00000584888 TMIGD1Q6UXZ0 262 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 KBTBD2Q8IY47 623 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 ST6GALNAC3Q8NDV1 305 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 CATSPER1Q8NEC5 780 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 DCAKDQ8WVC6 231 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 SEC16BQ96JE7 1060 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 TXLNGYQ9BZA5 131 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 CLK4Q9HAZ1 481 aaKnown RBP16.82■□□□□ 0.28
ERBB2-221ENST00000584888 LANCL2Q9NS86 450 aa16.82■□□□□ 0.28
ERBB2-221ENST00000584888 ZNF490Q9ULM2 529 aaPredicted RBP16.82■□□□□ 0.28
ERBB2-221ENST00000584888 C4orf51C9J302 202 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 KLK8O60259 260 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 B3GALT4O96024 378 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 SERPIND1P05546 499 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 ABHD2P08910 425 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 ZNF888P0CJ79 500 aaPredicted RBP16.81■□□□□ 0.28
ERBB2-221ENST00000584888 CD22P20273 847 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 IL10P22301 178 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 TYK2P29597 1187 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 AGTR2P50052 363 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 SERPINB8P50452 374 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 SERPINB9P50453 376 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 DOC2AQ14183 400 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 PCOLCEQ15113 449 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 TBCCQ15814 346 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 UAP1Q16222 522 aaPredicted RBP16.81■□□□□ 0.28
ERBB2-221ENST00000584888 PDK4Q16654 411 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 FAM83EQ2M2I3 478 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 DEFB134Q4QY38 66 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 FAAH2Q6GMR7 532 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 NIPAL1Q6NVV3 410 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 LRRC70Q7Z2Q7 622 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 MAMDC2Q7Z304 686 aaPredicted RBP16.81■□□□□ 0.28
ERBB2-221ENST00000584888 VN1R5Q7Z5H4 357 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERBB2-221ENST00000584888 PLPP5Q8NEB5 264 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 TTLQ8NG68 377 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 OR5T3Q8NGG3 340 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 PSMF1Q92530 271 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 IMMP1LQ96LU5 166 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 C5orf34Q96MH7 638 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 OR1F2PQ96R84 312 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 PAFAH2Q99487 392 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 L2HGDHQ9H9P8 463 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 ZNF180Q9UJW8 692 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 NOTCH2Q04721 2471 aa16.81■□□□□ 0.28
ERBB2-221ENST00000584888 A0A087WUV0 522 aaPredicted RBP16.8■□□□□ 0.28
ERBB2-221ENST00000584888 OR2W5A6NFC9 320 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 ZNF860A6NHJ4 632 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 CLGNO14967 610 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 CHST10O43529 356 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 WFS1O76024 890 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 CLDN1O95832 211 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 INHBAP08476 426 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 PRR35P0CG20 571 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 GSTM2P28161 218 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 GCAP28676 217 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 RHAGQ02094 409 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
ERBB2-221ENST00000584888 ADPRMQ3LIE5 342 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 ABHD13Q7L211 337 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 KRT78Q8N1N4 520 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
ERBB2-221ENST00000584888 FAR1Q8WVX9 515 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 PTCD3Q96EY7 689 aaKnown RBP16.8■□□□□ 0.28
ERBB2-221ENST00000584888 RHBGQ9H310 441 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 PTGFRNQ9P2B2 879 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 DOPEY1Q5JWR5 2465 aa16.8■□□□□ 0.28
ERBB2-221ENST00000584888 LRIT2A6NDA9 550 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 URADA6NGE7 173 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 SYCE1LA8MT33 242 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 SUPT3HB4E1H0 165 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 E2F3O00716 465 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 CCNT2O60583 730 aaKnown RBP16.79■□□□□ 0.28
ERBB2-221ENST00000584888 SUPT3HO75486 399 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 CLEC3AO75596 197 aa16.79■□□□□ 0.28
ERBB2-221ENST00000584888 S100BP04271 92 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms