RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	TNFRSF8	P28908	595 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	MAGEA12	P43365	314 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	SKP1	P63208	163 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	OLR1	P78380	273 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	E2F2	Q14209	437 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	RBBP5	Q15291	538 aa	Known RBP	12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	PDK4	Q16654	411 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	MINDY4	Q4G0A6	757 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	AGAP7P	Q5VUJ5	663 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	IRAK1BP1	Q5VVH5	260 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	NIPAL1	Q6NVV3	410 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	LANCL3	Q6ZV70	420 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	ABHD13	Q7L211	337 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	LRRC70	Q7Z2Q7	622 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	VN1R5	Q7Z5H4	357 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	TICAM1	Q8IUC6	712 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	RHEBL1	Q8TAI7	183 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	TM9SF4	Q92544	642 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	PEX11G	Q96HA9	241 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	SMIM10	Q96HG1	83 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	THOC3	Q96J01	351 aa	Known RBP	12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	AGAP4	Q96P64	663 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	OR1F2P	Q96R84	312 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	PAFAH2	Q99487	392 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	CAPS2	Q9BXY5	557 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	RBCK1	Q9BYM8	510 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	CD244	Q9BZW8	370 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	PITHD1	Q9GZP4	211 aa	Predicted RBP	12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	KLHL31	Q9H511	634 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	NT5DC2	Q9H857	520 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	LANCL2	Q9NS86	450 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	B3GNT3	Q9Y2A9	372 aa		12.55	□□□□□ -0.4
SREBF1-223	ENST00000584760	CENPE	Q02224	2701 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	CCDC189	A1A4V9	331 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	OR2W5	A6NFC9	320 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	DNAJB6	O75190	326 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	KLHL2	O95198	593 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	CBX6	O95503	412 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	TBX6	O95947	436 aa	Predicted RBP	12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	SERPINA7	P05543	415 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	CELA2A	P08217	269 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	HNRNPH1	P31943	449 aa	Known RBP	12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	HNF4A	P41235	474 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	GLRB	P48167	497 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	AGTR2	P50052	363 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	RAB8A	P61006	207 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	RHAG	Q02094	409 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	FAM83E	Q2M2I3	478 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	TOR1AIP1	Q5JTV8	583 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	MFSD4B	Q5TF39	518 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	ADNP2	Q6IQ32	1131 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760		Q6ZS92	163 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	KBTBD2	Q8IY47	623 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	KRT78	Q8N1N4	520 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	SNX31	Q8N9S9	440 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	LRRN4CL	Q8ND94	238 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	TTL	Q8NG68	377 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	PPP4R1	Q8TF05	950 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	PSMF1	Q92530	271 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	TBC1D20	Q96BZ9	403 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	SNRNP40	Q96DI7	357 aa	Known RBP	12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	PTCD3	Q96EY7	689 aa	Known RBP	12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	SEC16B	Q96JE7	1060 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	IMMP1L	Q96LU5	166 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	C5orf34	Q96MH7	638 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	GPR78	Q96P69	363 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	WDR77	Q9BQA1	342 aa	Predicted RBP	12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	NFU1	Q9UMS0	254 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	SLC5A6	Q9Y289	635 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	CSAG2	Q9Y5P2	127 aa		12.54	□□□□□ -0.4
SREBF1-223	ENST00000584760	IGHV3-20	A0A0C4DH32	117 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	LRIT2	A6NDA9	550 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	URAD	A6NGE7	173 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	SYCE1L	A8MT33	242 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CLGN	O14967	610 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CHST10	O43529	356 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CCNT2	O60583	730 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	H2AFY	O75367	372 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CLEC3A	O75596	197 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CDC123	O75794	336 aa	Predicted RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	FH	P07954	510 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	INHBA	P08476	426 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	TYK2	P29597	1187 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	SOX11	P35716	441 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	STXBP1	P61764	594 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	MFAP5	Q13361	173 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	DOC2A	Q14183	400 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	TBCC	Q15814	346 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	ADPRM	Q3LIE5	342 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	PLEKHN1	Q494U1	663 aa	Predicted RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	XKR6	Q5GH73	641 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	TECRL	Q5HYJ1	363 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	C1QL3	Q5VWW1	255 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	RIPOR1	Q6ZS17	1223 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	ANKRD37	Q7Z713	158 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CUZD1	Q86UP6	607 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	PLD6	Q8N2A8	252 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	ZADH2	Q8N4Q0	377 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CISD2	Q8N5K1	135 aa	Known RBP	12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms