RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SHISA5Q8N114 240 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 NOA1Q8NC60 698 aaKnown RBP12.39□□□□□ -0.43
ERBB2-220ENST00000584684 OR5T3Q8NGG3 340 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 RHEBL1Q8TAI7 183 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 DNAJB14Q8TBM8 379 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 PTCD3Q96EY7 689 aaKnown RBP12.39□□□□□ -0.43
ERBB2-220ENST00000584684 PEX11GQ96HA9 241 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 AICDAQ9GZX7 198 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 ALG9Q9H6U8 611 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 ASF1BQ9NVP2 202 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 NINJ2Q9NZG7 142 aa12.39□□□□□ -0.43
ERBB2-220ENST00000584684 DMGDHQ9UI17 866 aaKnown RBP12.39□□□□□ -0.43
ERBB2-220ENST00000584684 UTP20O75691 2785 aaKnown RBP12.39□□□□□ -0.43
ERBB2-220ENST00000584684 IGKV3D-11A0A0A0MRZ8 115 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 DYTNA2CJ06 578 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 LRIT2A6NDA9 550 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 CLGNO14967 610 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 PRAMEF4O60810 478 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 WFS1O76024 890 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 SEC24DO94855 1032 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-220ENST00000584684 CELA2AP08217 269 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 RNH1P13489 461 aaKnown RBP12.38□□□□□ -0.43
ERBB2-220ENST00000584684 EPORP19235 508 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 ECHS1P30084 290 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 CASP2P42575 452 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 KCNC1P48547 511 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 HSPA7P48741 367 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 TNFSF10P50591 281 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 NSDHLQ15738 373 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 TOR1AIP1Q5JTV8 583 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 PRAMEF9Q5VWM5 478 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 H3F3CQ6NXT2 135 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 LINC00696Q6ZRV3 163 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 CISD2Q8N5K1 135 aaKnown RBP12.38□□□□□ -0.43
ERBB2-220ENST00000584684 M1APQ8TC57 530 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 ADAMTS18Q8TE60 1221 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 HAS2Q92819 552 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 ISL2Q96A47 359 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 MS4A6EQ96DS6 147 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 FMO2Q99518 471 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 RBCK1Q9BYM8 510 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 CD244Q9BZW8 370 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 RHBGQ9H310 441 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 MMP25Q9NPA2 562 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 PTGFRNQ9P2B2 879 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 TEKT2Q9UIF3 430 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 NTNG1Q9Y2I2 539 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 ACOT9Q9Y305 439 aa12.38□□□□□ -0.43
ERBB2-220ENST00000584684 COPG1Q9Y678 874 aaKnown RBP12.38□□□□□ -0.43
ERBB2-220ENST00000584684 A0A088AWK7 358 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 TRAV17A0A0B4J275 112 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SYNDIG1LA6NDD5 238 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SYCE1LA8MT33 242 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 CBX6O95503 412 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 TBX6O95947 436 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 ALDOAP04075 364 aaKnown RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 MTHFD2P13995 350 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 CD22P20273 847 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 ZNF10P21506 573 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 HNRNPH1P31943 449 aaKnown RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SERPINB8P50452 374 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 RAB8AP61006 207 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 ARG2P78540 354 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 LAPTM5Q13571 262 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 DOC2AQ14183 400 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 NAA30Q147X3 362 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 FAM83EQ2M2I3 478 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 BTBD16Q32M84 506 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SFT2D3Q587I9 215 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 XKR6Q5GH73 641 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 PAGE2BQ5JRK9 111 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 ABHD17BQ5VST6 288 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 VN1R5Q7Z5H4 357 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 LGI4Q8N135 537 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SIRT6Q8N6T7 355 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SNX31Q8N9S9 440 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 SLC44A1Q8WWI5 657 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 TSLPQ969D9 159 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 C19orf60Q96EN9 201 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 CNDP1Q96KN2 507 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 LPAR4Q99677 370 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 NPLQ9BXD5 320 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
ERBB2-220ENST00000584684 KLHL31Q9H511 634 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 AGPAT4Q9NRZ5 378 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 ASB1Q9Y576 335 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 NAV2Q8IVL1 2488 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 UNC79Q9P2D8 2635 aa12.37□□□□□ -0.43
ERBB2-220ENST00000584684 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
ERBB2-220ENST00000584684 TCRBV16S1A1N1A0A5B0 115 aa12.36□□□□□ -0.43
ERBB2-220ENST00000584684 OR2W5A6NFC9 320 aa12.36□□□□□ -0.43
ERBB2-220ENST00000584684 ANKDD1BA6NHY2 528 aa12.36□□□□□ -0.43
ERBB2-220ENST00000584684 SUPT3HB4E1H0 165 aa12.36□□□□□ -0.43
ERBB2-220ENST00000584684 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-220ENST00000584684 CDK2AP1O14519 115 aa12.36□□□□□ -0.43
ERBB2-220ENST00000584684 ERI3O43414 337 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms